X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FTreeCanvas.java;h=f338492afbbd6a3491d1c54a7782082cc243a0e2;hb=629aab8cacd34324f5bd6aad568db5857fec8c81;hp=98299ab7a2fcbd2359fc0adf0a09a0f5b2cf1674;hpb=cce9f2efe50ca646b758e4473d1ea6e52d3a5aaf;p=jalview.git

diff --git a/src/jalview/gui/TreeCanvas.java b/src/jalview/gui/TreeCanvas.java
index 98299ab..f338492 100755
--- a/src/jalview/gui/TreeCanvas.java
+++ b/src/jalview/gui/TreeCanvas.java
@@ -88,7 +88,6 @@ public class TreeCanvas extends JPanel implements MouseListener, Runnable,
     scrollPane = scroller;
     addMouseListener(this);
     addMouseMotionListener(this);
-    PaintRefresher.Register(tp, ap.av.getSequenceSetId());
     ToolTipManager.sharedInstance().registerComponent(this);
   }
 
@@ -239,7 +238,7 @@ public class TreeCanvas extends JPanel implements MouseListener, Runnable,
       SequenceGroup selected = av.getSelectionGroup();
 
       if ( (selected != null) &&
-          selected.getSequences(false).contains( (SequenceI) node.element()))
+          selected.getSequences(null).contains( (SequenceI) node.element()))
       {
         g.setColor(Color.gray);
 
@@ -851,7 +850,7 @@ public class TreeCanvas extends JPanel implements MouseListener, Runnable,
         {
           Conservation c = new Conservation("Group",
                                             ResidueProperties.propHash, 3,
-                                            sg.getSequences(false),
+                                            sg.getSequences(null),
                                             sg.getStartRes(), sg.getEndRes());
 
           c.calculate();