X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FWebserviceInfo.java;h=961caa761a52b82a1eef0d39f95a829974f29b95;hb=155a17a423e980849fd4dc5f857da1a72b0010b9;hp=63ef9f0de57eb71c2851b27c82878d5bcde2d9d2;hpb=4eefb40838faa0a3c03be3480ff74ba2ac67a5c1;p=jalview.git
diff --git a/src/jalview/gui/WebserviceInfo.java b/src/jalview/gui/WebserviceInfo.java
old mode 100755
new mode 100644
index 63ef9f0..961caa7
--- a/src/jalview/gui/WebserviceInfo.java
+++ b/src/jalview/gui/WebserviceInfo.java
@@ -1,468 +1,948 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer
- * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
- *
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
- */
-package jalview.gui;
-
-import java.util.*;
-
-import java.awt.*;
-import java.awt.event.*;
-import java.awt.image.*;
-import javax.swing.*;
-
-import jalview.jbgui.*;
-
-
-/**
- * Base class for web service client thread and gui
- *
- * @author $author$
- * @version $Revision$
- */
-public class WebserviceInfo extends GWebserviceInfo
-{
-
- /** Job is Queued */
- public static final int STATE_QUEUING = 0;
-
- /** Job is Running */
- public static final int STATE_RUNNING = 1;
-
- /** Job has finished with no errors */
- public static final int STATE_STOPPED_OK = 2;
-
- /** Job has been cancelled with no errors */
- public static final int STATE_CANCELLED_OK = 3;
-
- /** job has stopped because of some error */
- public static final int STATE_STOPPED_ERROR = 4;
-
- /** job has failed because of some unavoidable service interruption */
- public static final int STATE_STOPPED_SERVERERROR = 5;
- int currentStatus = STATE_QUEUING;
- Image image;
- int angle = 0;
- String title = "";
- jalview.ws.WSClientI thisService;
- boolean serviceIsCancellable;
- JInternalFrame frame;
- JTabbedPane subjobs=null;
- java.util.Vector jobPanes = null;
- // tabbed or not
- public synchronized int addJobPane() {
- JScrollPane jobpane = new JScrollPane();
- JTextArea progressText = new JTextArea();
- progressText.setFont(new java.awt.Font("Verdana", 0, 10));
- progressText.setBorder(null);
- progressText.setEditable(false);
- progressText.setText("WS Job");
- progressText.setLineWrap(true);
- progressText.setWrapStyleWord(true);
- jobpane.setName("JobPane");
- jobpane.getViewport().add(progressText, null);
- jobpane.setBorder(null);
- if (jobPanes==null) {
- jobPanes = new Vector();
- }
- int newpane = jobPanes.size();
- jobPanes.add(jobpane);
-
- if (newpane==0) {
- this.add(jobpane, BorderLayout.CENTER);
- } else {
- if (newpane==1) {
- // revert to a tabbed pane.
- JScrollPane firstpane;
- this.remove(firstpane=(JScrollPane) jobPanes.get(0));
- subjobs=new JTabbedPane();
- this.add(subjobs, BorderLayout.CENTER);
- subjobs.add(firstpane);
- subjobs.setTitleAt(0, firstpane.getName());
- }
- subjobs.add(jobpane);
- }
- return newpane; // index for accessor methods below
- }
- /**
- * Creates a new WebserviceInfo object.
- *
- * @param title short name and job type
- * @param info reference or other human readable description
- */
- public WebserviceInfo(String title, String info)
- {
- init(title, info, 520, 500);
- }
-
- /**
- * Creates a new WebserviceInfo object.
- *
- * @param title DOCUMENT ME!
- * @param info DOCUMENT ME!
- * @param width DOCUMENT ME!
- * @param height DOCUMENT ME!
- */
- public WebserviceInfo(String title, String info, int width, int height)
- {
- init(title, info, width, height);
- }
-
- /**
- * DOCUMENT ME!
- *
- * @return DOCUMENT ME!
- */
- public jalview.ws.WSClientI getthisService()
- {
- return thisService;
- }
-
- /**
- * DOCUMENT ME!
- *
- * @param newservice DOCUMENT ME!
- */
- public void setthisService(jalview.ws.WSClientI newservice)
- {
- thisService = newservice;
- serviceIsCancellable = newservice.isCancellable();
- }
-
- /**
- * DOCUMENT ME!
- *
- * @param title DOCUMENT ME!
- * @param info DOCUMENT ME!
- * @param width DOCUMENT ME!
- * @param height DOCUMENT ME!
- */
- void init(String title, String info, int width, int height)
- {
- frame = new JInternalFrame();
- frame.setContentPane(this);
- Desktop.addInternalFrame(frame, title, width, height);
- frame.setClosable(false);
-
- this.title = title;
- setInfoText(info);
-
- java.net.URL url = getClass().getResource("/images/logo.gif");
- image = java.awt.Toolkit.getDefaultToolkit().createImage(url);
-
- MediaTracker mt = new MediaTracker(this);
- mt.addImage(image, 0);
-
- try
- {
- mt.waitForID(0);
- }
- catch (Exception ex)
- {
- }
-
- AnimatedPanel ap = new AnimatedPanel();
- titlePanel.add(ap, BorderLayout.CENTER);
-
- Thread thread = new Thread(ap);
- thread.start();
- }
-
- /**
- * DOCUMENT ME!
- *
- * @param status integer status from state constants
- */
- public void setStatus(int status)
- {
- currentStatus = status;
- }
- /**
- * subjob status indicator
- * @param jobpane
- * @param status
- */
- public void setStatus(int jobpane, int status) {
- if (jobpane<0 || jobpane>=jobPanes.size()) {
- throw new Error("setStatus called for non-existent job pane."+jobpane);
- }
- switch (status) {
- case STATE_QUEUING:
- setProgressText(jobpane, "QUEUED");
- break;
- case STATE_RUNNING:
- setProgressText(jobpane, "RUNNING");
- break;
- case STATE_STOPPED_OK:
- setProgressText(jobpane, "FINISHED");
- break;
- case STATE_CANCELLED_OK:
- setProgressText(jobpane, "CANCELLED");
- break;
- case STATE_STOPPED_ERROR:
- setProgressText(jobpane, "BROKEN");
- break;
- case STATE_STOPPED_SERVERERROR:
- setProgressText(jobpane, "ALERT");
- break;
- default:
- setProgressText(jobpane, "UNKNOWN STATE");
- }
- }
- /**
- * DOCUMENT ME!
- *
- * @return DOCUMENT ME!
- */
- public String getInfoText()
- {
- return infoText.getText();
- }
-
- /**
- * DOCUMENT ME!
- *
- * @param text DOCUMENT ME!
- */
- public void setInfoText(String text)
- {
- infoText.setText(text);
- }
-
- /**
- * DOCUMENT ME!
- *
- * @param text DOCUMENT ME!
- */
- public void appendInfoText(String text)
- {
- infoText.append(text);
- }
- /**
- * DOCUMENT ME!
- *
- * @return DOCUMENT ME!
- */
- public String getProgressText(int which)
- {
- if (jobPanes == null)
- addJobPane();
- return ( (JTextArea) ( (JScrollPane) jobPanes.get(which)).getViewport().
- getComponent(0)).getText();
- }
- /**
- * DOCUMENT ME!
- *
- * @param text DOCUMENT ME!
- */
- public void setProgressText(int which, String text)
- {
- if (jobPanes == null)
- addJobPane();
- ( (JTextArea) ( (JScrollPane) jobPanes.get(which)).getViewport().
- getComponent(0)).setText(text);
- }
-
- /**
- * DOCUMENT ME!
- *
- * @param text DOCUMENT ME!
- */
- public void appendProgressText(int which, String text)
- {
- if (jobPanes == null)
- addJobPane();
- ( (JTextArea) ( (JScrollPane) jobPanes.get(which)).getViewport().
- getComponent(0)).append(text);
- }
- /**
- * setProgressText(0, text)
- */
- public void setProgressText(String text)
- {
- setProgressText(0, text);
- }
- /**
- * appendProgressText(0, text)
- */
- public void appendProgressText(String text)
- {
- appendProgressText(0, text);
- }
- /**
- * getProgressText(0)
- */
- public String getProgressText()
- {
- return getProgressText(0);
- }
- /**
- * get the tab title for a subjob
- * @param which int
- * @return String
- */
- public String getProgressName(int which) {
- if (jobPanes==null)
- addJobPane();
- if (subjobs!=null)
- return subjobs.getTitleAt(which);
- else
- return ((JScrollPane) jobPanes.get(which)).getViewport().getComponent(0).getName();
- }
- /**
- * set the tab title for a subjob
- * @param name String
- * @param which int
- */
- public void setProgressName(String name, int which) {
- if (subjobs!=null)
- subjobs.setTitleAt(which, name);
- else
- ((JScrollPane) jobPanes.get(which)).getViewport().getComponent(0).setName(name);
- }
-
- /**
- * Gui action for cancelling the current job, if possible.
- *
- * @param e DOCUMENT ME!
- */
- protected void cancel_actionPerformed(ActionEvent e)
- {
- if (!serviceIsCancellable)
- {
- JOptionPane.showInternalMessageDialog(Desktop.desktop,
- "This job cannot be cancelled.\nJust close the window.", "Cancel job",
- JOptionPane.WARNING_MESSAGE);
- }
- else
- {
- frame.setClosable(true);
- thisService.cancelJob();
- }
- }
-
- public void setResultsReady()
- {
- frame.setClosable(true);
- buttonPanel.remove(cancel);
- buttonPanel.add(showResultsNewFrame);
- buttonPanel.add(mergeResults);
- buttonPanel.setLayout(new GridLayout(2,1,5,5));
- buttonPanel.validate();
- validate();
- }
-
-
- class AnimatedPanel extends JPanel implements Runnable
- {
- long startTime = 0;
- BufferedImage offscreen;
-
- public void run()
- {
- startTime = System.currentTimeMillis();
- Graphics2D g = null;
-
- while (currentStatus < STATE_STOPPED_OK)
- {
- try
- {
- Thread.sleep(50);
-
- int units = (int) ( (System.currentTimeMillis() - startTime) /
- 10f);
- angle += units;
- angle %= 360;
- startTime = System.currentTimeMillis();
-
- if (offscreen == null || offscreen.getWidth(this) != getWidth()
- || offscreen.getHeight(this) != getHeight())
- {
- offscreen = new BufferedImage(getWidth(), getHeight(),
- BufferedImage.TYPE_INT_ARGB);
- g = (Graphics2D) offscreen.getGraphics();
- }
-
- g.setColor(Color.white);
- g.fillRect(0, 0, getWidth(), getHeight());
-
- g.setFont(new Font("Arial", Font.BOLD, 12));
- g.setColor(Color.black);
-
- switch (currentStatus)
- {
- case STATE_QUEUING:
- g.drawString(title.concat(" - queuing"), 60, 30);
-
- break;
-
- case STATE_RUNNING:
- g.drawString(title.concat(" - running"), 60, 30);
-
- break;
-
- case STATE_STOPPED_OK:
- g.drawString(title.concat(" - complete"), 60, 30);
-
- break;
-
- case STATE_CANCELLED_OK:
- g.drawString(title.concat(" - job cancelled!"), 60, 30);
-
- break;
-
- case STATE_STOPPED_ERROR:
- g.drawString(title.concat(" - job error!"), 60, 30);
-
- break;
-
- case STATE_STOPPED_SERVERERROR:
- g.drawString(title.concat(" - Server Error! (try later)"),
- 60,
- 30);
-
- break;
- }
-
-
- if (currentStatus >= STATE_STOPPED_OK)
- angle = 0;
-
- if (image != null)
- {
- g.rotate(Math.toRadians(angle), 28, 28);
- g.drawImage(image, 10, 10, this);
- g.rotate( -Math.toRadians(angle), 28, 28);
- }
-
-
- repaint();
- }
- catch (Exception ex)
- {
- }
- }
-
- cancel.setEnabled(false);
- }
-
- public void paintComponent(Graphics g1)
- {
- g1.drawImage(offscreen, 0,0,this);
- }
- }
-}
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package jalview.gui;
+
+import java.awt.BorderLayout;
+import java.awt.Color;
+import java.awt.Dimension;
+import java.awt.Graphics;
+import java.awt.Graphics2D;
+import java.awt.GridLayout;
+import java.awt.Image;
+import java.awt.MediaTracker;
+import java.awt.RenderingHints;
+import java.awt.event.ActionEvent;
+import java.awt.image.BufferedImage;
+import java.util.Locale;
+import java.util.Vector;
+
+import javax.swing.JComponent;
+import javax.swing.JEditorPane;
+import javax.swing.JInternalFrame;
+import javax.swing.JPanel;
+import javax.swing.JScrollPane;
+import javax.swing.JTabbedPane;
+import javax.swing.JTextArea;
+import javax.swing.event.HyperlinkEvent;
+import javax.swing.event.HyperlinkListener;
+import javax.swing.event.InternalFrameAdapter;
+import javax.swing.event.InternalFrameEvent;
+import javax.swing.text.html.HTMLEditorKit;
+import javax.swing.text.html.StyleSheet;
+
+import jalview.jbgui.GWebserviceInfo;
+import jalview.util.ChannelProperties;
+import jalview.util.MessageManager;
+import jalview.ws.WSClientI;
+
+/**
+ * Base class for web service client thread and gui TODO: create StAX parser to
+ * extract html body content reliably when preparing html formatted job statuses
+ *
+ * @author $author$
+ * @version $Revision$
+ */
+public class WebserviceInfo extends GWebserviceInfo
+ implements HyperlinkListener, IProgressIndicator
+{
+
+ /** Job is Queued */
+ public static final int STATE_QUEUING = 0;
+
+ /** Job is Running */
+ public static final int STATE_RUNNING = 1;
+
+ /** Job has finished with no errors */
+ public static final int STATE_STOPPED_OK = 2;
+
+ /** Job has been cancelled with no errors */
+ public static final int STATE_CANCELLED_OK = 3;
+
+ /** job has stopped because of some error */
+ public static final int STATE_STOPPED_ERROR = 4;
+
+ /** job has failed because of some unavoidable service interruption */
+ public static final int STATE_STOPPED_SERVERERROR = 5;
+
+ int currentStatus = STATE_QUEUING;
+
+ Image image;
+
+ float angle = 0f;
+
+ String title = "";
+
+ jalview.ws.WSClientI thisService;
+
+ boolean serviceIsCancellable;
+
+ JInternalFrame frame;
+
+ private IProgressIndicator progressBar;
+
+ @Override
+ public void setVisible(boolean aFlag)
+ {
+ super.setVisible(aFlag);
+ frame.setVisible(aFlag);
+ }
+
+ JTabbedPane subjobs = null;
+
+ java.util.Vector jobPanes = null;
+
+ private boolean serviceCanMergeResults = false;
+
+ private boolean viewResultsImmediatly = true;
+
+ /**
+ * Get
+ *
+ * @param flag
+ * to indicate if results will be shown in a new window as soon as
+ * they are available.
+ */
+ public boolean isViewResultsImmediatly()
+ {
+ return viewResultsImmediatly;
+ }
+
+ /**
+ * Set
+ *
+ * @param flag
+ * to indicate if results will be shown in a new window as soon as
+ * they are available.
+ */
+ public void setViewResultsImmediatly(boolean viewResultsImmediatly)
+ {
+ this.viewResultsImmediatly = viewResultsImmediatly;
+ }
+
+ private StyleSheet getStyleSheet(HTMLEditorKit editorKit)
+ {
+
+ // Copied blatantly from
+ // http://www.velocityreviews.com/forums/t132265-string-into-htmldocument.html
+ StyleSheet myStyleSheet = new StyleSheet();
+
+ myStyleSheet.addStyleSheet(editorKit.getStyleSheet());
+
+ editorKit.setStyleSheet(myStyleSheet);
+
+ /*
+ * Set the style sheet rules here by reading them from the constants
+ * interface.
+ */
+ /*
+ * for (int ix=0; ixWS Job