X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FWsJobParameters.java;h=b80c23e38b3ece7119d8b8fa49d4d44bc4b29574;hb=ba1f9fee25b87bdac0c535019252b787939a8f80;hp=196eb32d09e712eb1b789af5868ea98436dd4a6f;hpb=c932f0e85a8852824cdd8ce790af68682732c85c;p=jalview.git

diff --git a/src/jalview/gui/WsJobParameters.java b/src/jalview/gui/WsJobParameters.java
index 196eb32..b80c23e 100644
--- a/src/jalview/gui/WsJobParameters.java
+++ b/src/jalview/gui/WsJobParameters.java
@@ -642,8 +642,9 @@ public class WsJobParameters extends JPanel implements ItemListener,
           }
           else
           {
-            jalview.bin.Console.errPrintln("Ignoring unknown service argument type "
-                    + myarg.getClass().getName());
+            jalview.bin.Console
+                    .errPrintln("Ignoring unknown service argument type "
+                            + myarg.getClass().getName());
           }
         }
       }
@@ -976,7 +977,8 @@ public class WsJobParameters extends JPanel implements ItemListener,
       disc.run();
     } catch (Exception e)
     {
-      jalview.bin.Console.errPrintln("Aborting. Problem discovering services.");
+      jalview.bin.Console
+              .errPrintln("Aborting. Problem discovering services.");
       e.printStackTrace();
       return;
     }
@@ -1034,11 +1036,13 @@ public class WsJobParameters extends JPanel implements ItemListener,
                   Option cpy = jalview.ws.jws2.ParameterUtils.copyOption(o);
                 } catch (Exception e)
                 {
-                  jalview.bin.Console.errPrintln("Failed to copy " + o.getName());
+                  jalview.bin.Console
+                          .errPrintln("Failed to copy " + o.getName());
                   e.printStackTrace();
                 } catch (Error e)
                 {
-                  jalview.bin.Console.errPrintln("Failed to copy " + o.getName());
+                  jalview.bin.Console
+                          .errPrintln("Failed to copy " + o.getName());
                   e.printStackTrace();
                 }
               }
@@ -1055,11 +1059,13 @@ public class WsJobParameters extends JPanel implements ItemListener,
                           .copyParameter(o);
                 } catch (Exception e)
                 {
-                  jalview.bin.Console.errPrintln("Failed to copy " + o.getName());
+                  jalview.bin.Console
+                          .errPrintln("Failed to copy " + o.getName());
                   e.printStackTrace();
                 } catch (Error e)
                 {
-                  jalview.bin.Console.errPrintln("Failed to copy " + o.getName());
+                  jalview.bin.Console
+                          .errPrintln("Failed to copy " + o.getName());
                   e.printStackTrace();
                 }
               }
@@ -1325,7 +1331,7 @@ public class WsJobParameters extends JPanel implements ItemListener,
    */
   protected void updateWebServiceMenus()
   {
-    for (AlignFrame alignFrame : Desktop.getAlignFrames())
+    for (AlignFrame alignFrame : Desktop.getDesktopAlignFrames())
     {
       alignFrame.BuildWebServiceMenu();
     }
@@ -1467,8 +1473,8 @@ public class WsJobParameters extends JPanel implements ItemListener,
           return;
         }
         curSetName = newname;
-        jalview.bin.Console.errPrintln("New name for user setting " + curSetName
-                + " (was " + setName.getSelectedItem() + ")");
+        jalview.bin.Console.errPrintln("New name for user setting "
+                + curSetName + " (was " + setName.getSelectedItem() + ")");
         if (curSetName.equals(setName.getSelectedItem()))
         {
           curSetName = null;