X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fhmmer%2FHmmerCommand.java;fp=src%2Fjalview%2Fhmmer%2FHmmerCommand.java;h=a30c524e8b21910baaaa557f7907fa2a5985ca95;hb=dd2b17330673faf79c5e239afd163668fdb3fe0a;hp=6eb294f553e6833f2a80dafae6b12588f8a5852c;hpb=d71391d37943d1f6a5bf0af74996229f4d290cb0;p=jalview.git

diff --git a/src/jalview/hmmer/HmmerCommand.java b/src/jalview/hmmer/HmmerCommand.java
index 6eb294f..a30c524 100644
--- a/src/jalview/hmmer/HmmerCommand.java
+++ b/src/jalview/hmmer/HmmerCommand.java
@@ -62,13 +62,15 @@ public abstract class HmmerCommand implements Runnable
 
   static final String TRIM_TERMINI_KEY = "label.trim_termini";
 
+  static final String RETURN_N_NEW_SEQ = "label.check_for_new_sequences";
+
   static final String REPORTING_CUTOFF_KEY = "label.reporting_cutoff";
 
-  static final String CUTOFF_NONE = "None";
+  static final String CUTOFF_NONE = "label.default";
 
-  static final String CUTOFF_SCORE = "Score";
+  static final String CUTOFF_SCORE = "label.score";
 
-  static final String CUTOFF_EVALUE = "E-Value";
+  static final String CUTOFF_EVALUE = "label.evalue";
 
   static final String SEQ_EVALUE_KEY = "label.seq_evalue";