X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FAlignFile.java;h=36dbdb6193df2e8055eca82770ca0e88a4167e7b;hb=b57a02c25e335d033c97f8a6bacd6b54f62bd2b6;hp=3ef721003a82c83babb5a951563de6ff79ff3c2a;hpb=1cc81e06ac2faa5ee4b8879e9fa019956e34259f;p=jalview.git

diff --git a/src/jalview/io/AlignFile.java b/src/jalview/io/AlignFile.java
index 3ef7210..36dbdb6 100755
--- a/src/jalview/io/AlignFile.java
+++ b/src/jalview/io/AlignFile.java
@@ -81,8 +81,9 @@ public abstract class AlignFile extends FileParse
     initData();
     parse();
     // sets the index of each sequence in the alignment
-    for( int i=0,c=seqs.size(); i<c; i++ ) {  
-    	seqs.get(i).setIndex(i);  
+    for (int i = 0, c = seqs.size(); i < c; i++)
+    {
+      seqs.get(i).setIndex(i);
     }
   }
 
@@ -99,8 +100,9 @@ public abstract class AlignFile extends FileParse
     initData();
     parse();
     // sets the index of each sequence in the alignment
-    for( int i=0,c=seqs.size(); i<c; i++ ) {  
-    	seqs.get(i).setIndex(i);  
+    for (int i = 0, c = seqs.size(); i < c; i++)
+    {
+      seqs.get(i).setIndex(i);
     }
   }