X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FAlignmentProperties.java;h=f2a6150dc69dd4254ba9da1f59c6e12dff91368a;hb=5a352aa2f3330ae269d9b70c4a7374c2518bfb2e;hp=9effa74d5f0fe749583d2f43ccededc54e4def9c;hpb=ad15cff29620f960119f80176f1fd443da9f6763;p=jalview.git diff --git a/src/jalview/io/AlignmentProperties.java b/src/jalview/io/AlignmentProperties.java index 9effa74..f2a6150 100644 --- a/src/jalview/io/AlignmentProperties.java +++ b/src/jalview/io/AlignmentProperties.java @@ -20,14 +20,14 @@ */ package jalview.io; -import java.io.StringWriter; +import jalview.datamodel.Alignment; +import jalview.datamodel.AlignmentI; + import java.io.PrintWriter; +import java.io.StringWriter; import java.util.Enumeration; import java.util.Hashtable; -import jalview.datamodel.Alignment; -import jalview.datamodel.AlignmentI; - /** * Render associated attributes of an alignment. The heart of this code was * refactored from jalview.gui.AlignFrame and jalview.appletgui.AlignFrame TODO: @@ -61,11 +61,15 @@ public class AlignmentProperties - alignment.getSequenceAt(i).getStart(); avg += size; if (size > max) + { max = size; + } if (size < min) + { min = size; + } } - avg = avg / (float) alignment.getHeight(); + avg = avg / alignment.getHeight(); pw.print(nl); pw.print("Sequences: " + alignment.getHeight()); pw.print(nl);