X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FAppletFormatAdapter.java;h=5366cb41d795d00bdbe95c15a863826454f1ddd8;hb=7c5e7c1c51a48eab1b217a221df82748c35b76b1;hp=ed49d5ef79c55572b4f9e3ede8ba14a21bf547d9;hpb=bdba25716eaa9492681532cb443c18ed34237488;p=jalview.git

diff --git a/src/jalview/io/AppletFormatAdapter.java b/src/jalview/io/AppletFormatAdapter.java
index ed49d5e..5366cb4 100755
--- a/src/jalview/io/AppletFormatAdapter.java
+++ b/src/jalview/io/AppletFormatAdapter.java
@@ -236,7 +236,7 @@ public class AppletFormatAdapter
       }
       else if (format.equals("PDB"))
       {
-        afile = new MCview.PDBfile(inFile, type);
+        afile = new MCview.PDBfile(true,true,inFile, type);
         // Uncomment to test Jmol data based PDB processing: JAL-1213
         // afile = new jalview.ext.jmol.PDBFileWithJmol(inFile, type);
       }
@@ -357,7 +357,7 @@ public class AppletFormatAdapter
       }
       else if (format.equals("PDB"))
       {
-        afile = new MCview.PDBfile(source);
+        afile = new MCview.PDBfile(true,true,source);
       }
       else if (format.equals("STH"))
       {