X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FAppletFormatAdapter.java;h=637db81b2cf01f4c1512bd841dd29766e2607a7d;hb=1a8f953dd71a9e319e910261927f269d69b4692c;hp=d55bab5a93ad8b40df63b316c96284a935ec4491;hpb=28787d9646cca5dd77190930f59b7ff32cf995b4;p=jalview.git diff --git a/src/jalview/io/AppletFormatAdapter.java b/src/jalview/io/AppletFormatAdapter.java index d55bab5..637db81 100755 --- a/src/jalview/io/AppletFormatAdapter.java +++ b/src/jalview/io/AppletFormatAdapter.java @@ -67,7 +67,7 @@ public class AppletFormatAdapter */ public static final String[] READABLE_EXTENSIONS = new String[] { "fa,faa,fasta,fastq", "aln", "pfam", "msf", "pir", "blc", "amsa", "jar", - "sto,stk","xml" }; // , + "sto,stk","xml,rnaml" }; // , // ".blast" // }; @@ -296,7 +296,7 @@ public class AppletFormatAdapter * * @return DOCUMENT ME! */ - public Alignment readFromFile(FileParse source, String format) + public AlignmentI readFromFile(FileParse source, String format) throws java.io.IOException { // TODO: generalise mapping between format string and io. class instances