X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FAppletFormatAdapter.java;h=8c376fcfbfd3c5ea7f681e09f4d8b32c099a87d8;hb=7047b076a62df177047ceb16c3611efe020bdd76;hp=95cbb6128a4619117cc92b542f684627b3caa04e;hpb=c9a98f3738fa773afd01ea5d5881b604855fa1b8;p=jalview.git diff --git a/src/jalview/io/AppletFormatAdapter.java b/src/jalview/io/AppletFormatAdapter.java index 95cbb61..8c376fc 100755 --- a/src/jalview/io/AppletFormatAdapter.java +++ b/src/jalview/io/AppletFormatAdapter.java @@ -178,9 +178,9 @@ public class AppletFormatAdapter } else { - // todo is MCview parsing obsolete yet? JAL-2120 + // todo is mc_view parsing obsolete yet? JAL-2120 StructureImportSettings.setShowSeqFeatures(true); - alignFile = new MCview.PDBfile(annotFromStructure, + alignFile = new mc_view.PDBfile(annotFromStructure, localSecondaryStruct, serviceSecondaryStruct, inFile, sourceType); } @@ -265,7 +265,7 @@ public class AppletFormatAdapter else { StructureImportSettings.setShowSeqFeatures(true); - alignFile = new MCview.PDBfile(annotFromStructure, + alignFile = new mc_view.PDBfile(annotFromStructure, localSecondaryStruct, serviceSecondaryStruct, source); } ((StructureFile) alignFile).setDbRefType(Type.PDB);