X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FAppletFormatAdapter.java;h=c5a80e339fd64c383133e23f29f7f159a91bacd1;hb=35ce4609cc8a776b1d85a1f2c2c70aaa106c1a3b;hp=1bb7ba3508269494d5e7869e799f8c9b4a34ac39;hpb=88895ebd5fe3f92e288261dfee9eb8f59aedfefd;p=jalview.git

diff --git a/src/jalview/io/AppletFormatAdapter.java b/src/jalview/io/AppletFormatAdapter.java
index 1bb7ba3..c5a80e3 100755
--- a/src/jalview/io/AppletFormatAdapter.java
+++ b/src/jalview/io/AppletFormatAdapter.java
@@ -64,7 +64,7 @@ public class AppletFormatAdapter
    */
   boolean serviceSecondaryStruct = false;
 
-  private AlignmentFileI alignFile = null;
+  private AlignmentFileReaderI alignFile = null;
 
   String inFile;
 
@@ -370,7 +370,7 @@ public class AppletFormatAdapter
   {
     try
     {
-      AlignmentFileI afile = format.getWriter(alignment);
+      AlignmentFileWriterI afile = format.getWriter(alignment);
 
       afile.setNewlineString(newline);
       afile.setExportSettings(exportSettings);
@@ -648,7 +648,7 @@ public class AppletFormatAdapter
     return null;
   }
 
-  public AlignmentFileI getAlignFile()
+  public AlignmentFileReaderI getAlignFile()
   {
     return alignFile;
   }