X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FAppletFormatAdapter.java;h=df432cc8a048edcd7137e30d906a880c7935d28a;hb=3ffe37a03a353140f7bf2b34e4617860aca28f22;hp=9da144a961315d3bd0be7716188fb469ca5ecc7c;hpb=49cc4c921eac8fd966dfe4fa4b86d00655ea2f67;p=jalview.git

diff --git a/src/jalview/io/AppletFormatAdapter.java b/src/jalview/io/AppletFormatAdapter.java
index 9da144a..df432cc 100755
--- a/src/jalview/io/AppletFormatAdapter.java
+++ b/src/jalview/io/AppletFormatAdapter.java
@@ -36,7 +36,7 @@ public class AppletFormatAdapter
 
   public static final String[] WRITEABLE_FORMATS = new String[]
       {
-      "BLC", "CLUSTAL", "FASTA", "MSF", "PileUp", "PIR", "PFAM" //, "AMSA"
+      "BLC", "CLUSTAL", "FASTA", "MSF", "PileUp", "PIR", "PFAM" , "AMSA"
   };
 
   public static String INVALID_CHARACTERS = "Contains invalid characters";
@@ -218,9 +218,11 @@ public class AppletFormatAdapter
       {
         afile = new StockholmFile();
       }
-      else if (format.equals("AMSA"))
+      else if (format.equalsIgnoreCase("AMSA"))
       {
         afile = new AMSAFile(alignment);
+      } else {
+        throw new Exception("Implementation error: Unknown file format string");
       }
 
       afile.addJVSuffix(jvsuffix);