X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FClustalFile.java;fp=src%2Fjalview%2Fio%2FClustalFile.java;h=049606d87b3683dbb53e5fb30a043274af65e3fc;hb=db93a1adcbe0a4eaaf06e0a70ade0d6c5c1961c3;hp=aec1a5dad7eda41793db4dcf069c251b93e8c07f;hpb=a90e2fe3cc3b779521a81cf8de410936f3a777c1;p=jalview.git

diff --git a/src/jalview/io/ClustalFile.java b/src/jalview/io/ClustalFile.java
index aec1a5d..049606d 100755
--- a/src/jalview/io/ClustalFile.java
+++ b/src/jalview/io/ClustalFile.java
@@ -47,11 +47,13 @@ public class ClustalFile extends AlignFile
     super(source);
   }
 
+  @Override
   public void initData()
   {
     super.initData();
   }
 
+  @Override
   public void parse() throws IOException
   {
     int i = 0;
@@ -193,6 +195,7 @@ public class ClustalFile extends AlignFile
     }
   }
 
+  @Override
   public String print()
   {
     return print(getSeqsAsArray());
@@ -233,7 +236,7 @@ public class ClustalFile extends AlignFile
     maxid++;
 
     int len = 60;
-    int nochunks = (max / len) + 1;
+    int nochunks = (max / len) + (max % len > 0 ? 1 : 0);
 
     for (i = 0; i < nochunks; i++)
     {