X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FDasSequenceFeatureFetcher.java;h=b4dd1f66ddb0472f9eed4f09d03da4ea77760de3;hb=4f24ef0848cf3c43ba0467f31fce1baa5c57aad5;hp=20ae27c2b34bd1137cbd2db26ea38b03081a7f9c;hpb=6853e551dad73c21f52fefa6bf619443f09107ab;p=jalview.git

diff --git a/src/jalview/io/DasSequenceFeatureFetcher.java b/src/jalview/io/DasSequenceFeatureFetcher.java
index 20ae27c..b4dd1f6 100755
--- a/src/jalview/io/DasSequenceFeatureFetcher.java
+++ b/src/jalview/io/DasSequenceFeatureFetcher.java
@@ -83,7 +83,8 @@ public class DasSequenceFeatureFetcher implements Runnable
       DasCoordinateSystem[] coords = source.getCoordinateSystem();
       for (int c = 0; c < coords.length; c++)
       {
-        if (coords[c].getName().equalsIgnoreCase("UniProt"))
+        System.out.println(coords[c].getName());
+        if (coords[c].getName().indexOf("UniProt")>-1)
         {
           uniprotCount++;
           break;
@@ -99,9 +100,10 @@ public class DasSequenceFeatureFetcher implements Runnable
       {
         for(int j=0; j<dbref.size(); j++)
         {
-          System.out.println(dbref.elementAt(j)
+          DBRefEntry entry = (DBRefEntry)dbref.elementAt(j);
+          System.out.println(entry.getSource()
                              +" "+jalview.datamodel.DBRefSource.UNIPROT);
-          if(dbref.elementAt(j)
+          if(entry.getSource()
              .equals(jalview.datamodel.DBRefSource.UNIPROT))
           {
             System.out.println("got a match");