X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FFastaFile.java;h=0e964b33d14c9e9ba2a09844f6940f723fa9c120;hb=8eb35a7bab22595255245c5136dd780816b98f26;hp=f3d3e5bf91e009a17b0ba8b0fe29d9dba7ac1433;hpb=c5677e9860106a821a3e6e0429b20ede7b9a732a;p=jalview.git diff --git a/src/jalview/io/FastaFile.java b/src/jalview/io/FastaFile.java index f3d3e5b..0e964b3 100755 --- a/src/jalview/io/FastaFile.java +++ b/src/jalview/io/FastaFile.java @@ -1,13 +1,13 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8) + * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * + * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR @@ -19,13 +19,6 @@ package jalview.io; import java.io.*; -import javax.xml.parsers.ParserConfigurationException; - -import org.xml.sax.SAXException; - -import fr.orsay.lri.varna.exceptions.ExceptionFileFormatOrSyntax; -import fr.orsay.lri.varna.exceptions.ExceptionLoadingFailed; -import fr.orsay.lri.varna.exceptions.ExceptionPermissionDenied; import jalview.datamodel.*; @@ -61,19 +54,13 @@ public class FastaFile extends AlignFile * * @throws IOException * DOCUMENT ME! - * @throws SAXException - * @throws ParserConfigurationException - * @throws ExceptionFileFormatOrSyntax - * @throws ExceptionLoadingFailed - * @throws ExceptionPermissionDenied - * @throws InterruptedException */ - public FastaFile(String inFile, String type) throws IOException, ExceptionFileFormatOrSyntax, ParserConfigurationException, SAXException, ExceptionPermissionDenied, ExceptionLoadingFailed, InterruptedException + public FastaFile(String inFile, String type) throws IOException { super(inFile, type); } - public FastaFile(FileParse source) throws IOException, ExceptionFileFormatOrSyntax, ParserConfigurationException, SAXException, ExceptionPermissionDenied, ExceptionLoadingFailed, InterruptedException + public FastaFile(FileParse source) throws IOException { super(source); }