X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FFastaFile.java;h=b8e001a02fc2de75edaa3e286d9bb4dfe60704cb;hb=c8f5deb89ce327cd4a103025122e2ee11a4c97fb;hp=034e129d0026272189cab63112bccb36023c62da;hpb=d423f22792e47dbc800ae220a58677f988971d06;p=jalview.git diff --git a/src/jalview/io/FastaFile.java b/src/jalview/io/FastaFile.java index 034e129..b8e001a 100755 --- a/src/jalview/io/FastaFile.java +++ b/src/jalview/io/FastaFile.java @@ -1,5 +1,5 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5) + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6) * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle * * This file is part of Jalview. @@ -203,7 +203,7 @@ public class FastaFile extends AlignFile out.append(" " + s[i].getDescription()); } - out.append("\n"); + out.append(newline); int nochunks = (s[i].getLength() / len) + 1; @@ -214,12 +214,12 @@ public class FastaFile extends AlignFile if (end < s[i].getLength()) { - out.append(s[i].getSequenceAsString(start, end) + "\n"); + out.append(s[i].getSequenceAsString(start, end) + newline); } else if (start < s[i].getLength()) { out.append(s[i].getSequenceAsString(start, s[i].getLength()) - + "\n"); + + newline); } }