X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FFeaturesFile.java;h=aa21b0f653f870544c337266c37e8fe8f1fe5fe1;hb=a83adb45bdf9554e270921b4baad94defd314b36;hp=1fb45bc11963a36935a35e0d0ea7bfe622589eab;hpb=881c6a099be11108b04ff7446204dfc0623fb0b2;p=jalview.git

diff --git a/src/jalview/io/FeaturesFile.java b/src/jalview/io/FeaturesFile.java
index 1fb45bc..aa21b0f 100755
--- a/src/jalview/io/FeaturesFile.java
+++ b/src/jalview/io/FeaturesFile.java
@@ -829,14 +829,15 @@ public class FeaturesFile extends AlignFile implements FeaturesSourceI
     AlignViewportI av = getViewport();
     if (av != null)
     {
-      if (av.getAlignment() != null)
+      AlignmentI a = av.getAlignment();
+      if (a != null)
       {
-        dataset = av.getAlignment().getDataset();
+        dataset = a.getDataset();
       }
       if (dataset == null)
       {
         // working in the applet context ?
-        dataset = av.getAlignment();
+        dataset = a;
       }
     }
     else