X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FFileParse.java;h=2dec5592664b9889095ed0d9f4618696cc1524d1;hb=cb8e52fbbc5f725e3f7f48c672cdddb0690bd978;hp=2ff0d2715ca92907704efb0107d61295b728a2ac;hpb=ecd82724000bd2465be8600d785133c97ea5af40;p=jalview.git diff --git a/src/jalview/io/FileParse.java b/src/jalview/io/FileParse.java index 2ff0d27..2dec559 100755 --- a/src/jalview/io/FileParse.java +++ b/src/jalview/io/FileParse.java @@ -41,7 +41,7 @@ import jalview.api.AlignExportSettingsI; import jalview.api.AlignViewportI; import jalview.api.AlignmentViewPanel; import jalview.api.FeatureSettingsModelI; -import jalview.bin.Cache; +import jalview.bin.Console; import jalview.util.MessageManager; import jalview.util.Platform; @@ -225,12 +225,12 @@ public class FileParse { if (!input.markSupported()) { - Cache.log.error( + Console.error( "FileParse.izGzipStream: input stream must support mark/reset"); return false; } input.mark(4); - + // get first 2 bytes or return false byte[] bytes = new byte[2]; int read = input.read(bytes); @@ -239,7 +239,7 @@ public class FileParse { return false; } - + int header = (bytes[0] & 0xff) | ((bytes[1] << 8) & 0xff00); return (GZIPInputStream.GZIP_MAGIC == header); }