X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FFormatAdapter.java;h=3027ab1bb1cb83bb9077afda60194196ab96e248;hb=3d0101179759ef157b088ea135423cd909512d9f;hp=f09e8a0e4e80e27c23b95c074fb82627e7e906dc;hpb=d1707d4c26db76cfeb640f0dbeb3e3427fd40eb7;p=jalview.git

diff --git a/src/jalview/io/FormatAdapter.java b/src/jalview/io/FormatAdapter.java
index f09e8a0..3027ab1 100755
--- a/src/jalview/io/FormatAdapter.java
+++ b/src/jalview/io/FormatAdapter.java
@@ -116,8 +116,8 @@ public class FormatAdapter extends AppletFormatAdapter
           startIndex = startEnd[0];
           endIndex = startEnd[1];
           // get first non-gaped residue start position
-          while (Comparison.isGap(seqs[i]
-                  .getCharAt(startIndex)) && startIndex < endIndex)
+          while (Comparison.isGap(seqs[i].getCharAt(startIndex))
+                  && startIndex < endIndex)
           {
             startIndex++;
           }