X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FHTMLOutput.java;h=08eacd681b0abcd996a2ce904e6f2f46c60f9717;hb=ce728f87f1f43be3041ef02f7f2cc2e39314711a;hp=e4dc83e9d35912535e26518c3aeba827f38e93e3;hpb=93020ed6ef8dd285c987f79d258508bd53187433;p=jalview.git

diff --git a/src/jalview/io/HTMLOutput.java b/src/jalview/io/HTMLOutput.java
index e4dc83e..08eacd6 100755
--- a/src/jalview/io/HTMLOutput.java
+++ b/src/jalview/io/HTMLOutput.java
@@ -205,9 +205,9 @@ public class HTMLOutput
         "<table border=\"0\"  cellpadding=\"0\" cellspacing=\"0\">\n");
 
     for (int startRes = 0; startRes < al.getWidth();
-         startRes += av.getChunkWidth())
+         startRes += av.getWrappedWidth())
     {
-      int endRes = startRes + av.getChunkWidth();
+      int endRes = startRes + av.getWrappedWidth();
 
       if (endRes > al.getWidth())
       {