X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FHTMLOutput.java;h=f7a0f3fa06e295e2d7ec414ae8aa7a3bdc50bae1;hb=37a5dfc3c72a42689e90ad8a0e118e8855d9868b;hp=beb88293300e55c1db2a0cb1c9727a511d9d77e7;hpb=55e2e9b22b133db8b9ff0979b0338a33081fc8fd;p=jalview.git

diff --git a/src/jalview/io/HTMLOutput.java b/src/jalview/io/HTMLOutput.java
index beb8829..f7a0f3f 100755
--- a/src/jalview/io/HTMLOutput.java
+++ b/src/jalview/io/HTMLOutput.java
@@ -32,11 +32,13 @@ public class HTMLOutput
   FeatureRenderer fr;
   Color color;
 
-  public HTMLOutput(AlignViewport av, SequenceRenderer sr, FeatureRenderer fr)
+  public HTMLOutput(AlignViewport av, SequenceRenderer sr, FeatureRenderer fr1)
   {
     this.av = av;
     this.sr = sr;
-    this.fr = fr;
+
+    fr = new FeatureRenderer(av);
+    fr.transferSettings(fr1);
 
     JalviewFileChooser chooser = new JalviewFileChooser(jalview.bin.Cache.
         getProperty(