X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FHTMLOutput.java;h=fd51823c9277734de36dd88550ef599f111df726;hb=06fef82a8d6fcdcfadc58d747f9f774297cd639d;hp=b70ba68f1a3bebcf2b3ed64ec3720fdb8b26967b;hpb=7e0e6d29fbd9fe42b1baa82bc03fb899c4e5e1e2;p=jalview.git
diff --git a/src/jalview/io/HTMLOutput.java b/src/jalview/io/HTMLOutput.java
index b70ba68..fd51823 100755
--- a/src/jalview/io/HTMLOutput.java
+++ b/src/jalview/io/HTMLOutput.java
@@ -19,14 +19,17 @@ public class HTMLOutput
{
this.av = av;
sr = new SequenceRenderer(av);
- JFileChooser chooser = new JFileChooser(jalview.bin.Cache.LAST_DIRECTORY);
+ JalviewFileChooser chooser = new JalviewFileChooser(jalview.bin.Cache.getProperty("LAST_DIRECTORY")
+ , new String[]{"html"}, "HTML files");
+
+ chooser.setFileView(new JalviewFileView());
chooser.setDialogTitle("Save as HTML");
chooser.setToolTipText("Save");
int value = chooser.showSaveDialog(null);
- if(value == JFileChooser.APPROVE_OPTION)
+ if(value == JalviewFileChooser.APPROVE_OPTION)
{
String choice = chooser.getSelectedFile().getPath();
- jalview.bin.Cache.LAST_DIRECTORY = choice;
+ jalview.bin.Cache.setProperty("LAST_DIRECTORY", choice);
try{
PrintWriter out = new java.io.PrintWriter(new java.io.FileWriter(choice));
out.println("");
@@ -89,7 +92,11 @@ public class HTMLOutput
{
seq = alignment.getSequenceAt(i);
groups = alignment.findAllGroups( seq );
- out.println("| "+seq.getDisplayId()+" | ");
+ if(av.getShowFullId())
+ out.println("
| "+seq.getDisplayId()+" | ");
+ else
+ out.println("
| "+seq.getName()+" | ");
+
for (int res = 0; res < seq.getLength(); res++)
@@ -171,7 +178,10 @@ public class HTMLOutput
out.println("
");
seq = al.getSequenceAt(s);
groups = al.findAllGroups( seq );
- out.println("| "+seq.getDisplayId()+" | ");
+ if(av.getShowFullId())
+ out.println(""+seq.getDisplayId()+" | ");
+ else
+ out.println(""+seq.getName()+" | ");
for (int res = startRes; res < endRes; res++)
{