X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FHTMLOutput.java;h=fd51823c9277734de36dd88550ef599f111df726;hb=06fef82a8d6fcdcfadc58d747f9f774297cd639d;hp=d48c068872c262b0296cd7178efed360ec301e69;hpb=6f3fc393f90ea0460caeca7e229e505741c51bd4;p=jalview.git

diff --git a/src/jalview/io/HTMLOutput.java b/src/jalview/io/HTMLOutput.java
index d48c068..fd51823 100755
--- a/src/jalview/io/HTMLOutput.java
+++ b/src/jalview/io/HTMLOutput.java
@@ -19,11 +19,14 @@ public class HTMLOutput
   {
     this.av = av;
     sr = new SequenceRenderer(av);
-    JFileChooser chooser = new JFileChooser(jalview.bin.Cache.getProperty("LAST_DIRECTORY"));
+    JalviewFileChooser chooser = new JalviewFileChooser(jalview.bin.Cache.getProperty("LAST_DIRECTORY")
+        , new String[]{"html"}, "HTML files");
+
+    chooser.setFileView(new JalviewFileView());
     chooser.setDialogTitle("Save as HTML");
     chooser.setToolTipText("Save");
     int value = chooser.showSaveDialog(null);
-    if(value == JFileChooser.APPROVE_OPTION)
+    if(value == JalviewFileChooser.APPROVE_OPTION)
     {
       String choice =  chooser.getSelectedFile().getPath();
       jalview.bin.Cache.setProperty("LAST_DIRECTORY",  choice);
@@ -89,7 +92,11 @@ public class HTMLOutput
     {
       seq = alignment.getSequenceAt(i);
       groups = alignment.findAllGroups( seq );
-      out.println("<tr><td nowrap>"+seq.getDisplayId()+"&nbsp;&nbsp;</td>");
+      if(av.getShowFullId())
+        out.println("<tr><td nowrap>"+seq.getDisplayId()+"&nbsp;&nbsp;</td>");
+      else
+        out.println("<tr><td nowrap>"+seq.getName()+"&nbsp;&nbsp;</td>");
+
 
 
       for (int res = 0; res < seq.getLength(); res++)
@@ -171,7 +178,10 @@ public class HTMLOutput
          out.println("<tr>");
          seq = al.getSequenceAt(s);
          groups = al.findAllGroups( seq );
-         out.println("<td nowrap>"+seq.getDisplayId()+"&nbsp;&nbsp;</td>");
+         if(av.getShowFullId())
+           out.println("<td nowrap>"+seq.getDisplayId()+"&nbsp;&nbsp;</td>");
+         else
+           out.println("<td nowrap>"+seq.getName()+"&nbsp;&nbsp;</td>");
 
          for (int res = startRes; res < endRes; res++)
               {