X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FIdentifyFile.java;h=4fb2516873b74e99d53dfa747ac56565da6591aa;hb=67f546e39d0c247fef34a5fbb7ac841be7bae5be;hp=9c7478b7f5183f5a7102d366c119210b7ded6635;hpb=77abb3fac2965a8966410cd77cd749c7c1dc6453;p=jalview.git

diff --git a/src/jalview/io/IdentifyFile.java b/src/jalview/io/IdentifyFile.java
index 9c7478b..4fb2516 100755
--- a/src/jalview/io/IdentifyFile.java
+++ b/src/jalview/io/IdentifyFile.java
@@ -136,8 +136,14 @@ public class IdentifyFile
 
           break;
         }
+        // if (data.matches("<(\"[^\"]*\"|'[^']*'|[^'\">])*>"))
+        if (data.matches("<(?i)html(\"[^\"]*\"|'[^']*'|[^'\">])*>"))
+        {
+          reply = "HTML";
+          break;
+        }
 
-        if ((data.indexOf("<") > -1))
+        if (data.matches("<(?i)rnaml (\"[^\"]*\"|'[^']*'|[^'\">])*>"))
         {
           reply = "RNAML";
 
@@ -275,6 +281,7 @@ public class IdentifyFile
           break;
         }
 
+
         /*
          * // TODO comment out SimpleBLAST identification for Jalview 2.4.1 else
          * if (!lineswereskipped && data.indexOf("BLAST")<4) { reply =
@@ -320,6 +327,7 @@ public class IdentifyFile
 
   public static void main(String[] args)
   {
+
     for (int i = 0; args != null && i < args.length; i++)
     {
       IdentifyFile ider = new IdentifyFile();