X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FIdentifyFile.java;h=5307e9526f2c972222290b7b83a107c8b64b69cd;hb=8d2724b83aca38ef75d68787cc5939d950467e63;hp=d30ed202e8ad00ef01e8bd49914cf5e8a7211036;hpb=b57a02c25e335d033c97f8a6bacd6b54f62bd2b6;p=jalview.git diff --git a/src/jalview/io/IdentifyFile.java b/src/jalview/io/IdentifyFile.java index d30ed20..5307e95 100755 --- a/src/jalview/io/IdentifyFile.java +++ b/src/jalview/io/IdentifyFile.java @@ -1,24 +1,24 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1) + * Copyright (C) 2014 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * + * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.io; import java.io.*; -import java.net.*; /** * DOCUMENT ME! @@ -132,6 +132,13 @@ public class IdentifyFile break; } + + if ((data.indexOf("<") > -1)) + { + reply = "RNAML"; + + break; + } if ((data.length() < 1) || (data.indexOf("#") == 0)) { @@ -160,6 +167,8 @@ public class IdentifyFile break; } + + else if (data.indexOf(">") > -1) { // FASTA, PIR file or BLC file