X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FJPredFile.java;h=3f308be12c4c47406e231a6713230dcc7a30e6dd;hb=558597672640984d936ea22409a674293192a09c;hp=c431cc4ef51686f25614952749df7cf691a5f7a0;hpb=76c24ab6ae0061a19daa180aa9b1ff76db533d37;p=jalview.git

diff --git a/src/jalview/io/JPredFile.java b/src/jalview/io/JPredFile.java
index c431cc4..3f308be 100755
--- a/src/jalview/io/JPredFile.java
+++ b/src/jalview/io/JPredFile.java
@@ -270,13 +270,6 @@ public class JPredFile extends AlignFile
                     seq_entries.elementAt(i).toString(), 1,
                     seq_entries.elementAt(i).toString().length());
 
-            if (!Symscores.containsKey(ids.elementAt(i)) &&
-                    !isValidProteinSequence(newSeq.getSequence()))
-            {
-                throw new IOException("JPredConcise: "
-                                      +AppletFormatAdapter.INVALID_CHARACTERS +" : "
-                                      +ids.elementAt(i).toString() + ")");
-            }
 
             if (maxLength != seq_entries.elementAt(i).toString().length())
             {