X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FJnetAnnotationMaker.java;h=7252e5dc122f8f846f294a4d7e54b674c696b3ed;hb=57c960648b550f10c7db40e39c7bb6a761d732b1;hp=a4160c593f107c6f1ea6c3a79efa7627d795a37e;hpb=d423f22792e47dbc800ae220a58677f988971d06;p=jalview.git diff --git a/src/jalview/io/JnetAnnotationMaker.java b/src/jalview/io/JnetAnnotationMaker.java index a4160c5..7252e5d 100755 --- a/src/jalview/io/JnetAnnotationMaker.java +++ b/src/jalview/io/JnetAnnotationMaker.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5) - * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) + * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle * * This file is part of Jalview. * @@ -95,8 +95,8 @@ public class JnetAnnotationMaker { for (int j = 0; j < width; j++) { - annotations[gapmap[j]] = new Annotation("", "", preds[i] - .getCharAt(j), 0); + annotations[gapmap[j]] = new Annotation("", "", + preds[i].getCharAt(j), 0); } } else @@ -126,9 +126,9 @@ public class JnetAnnotationMaker { float value = new Float(preds[i].getCharAt(j) + "") .floatValue(); - annotations[gapmap[delMap[j]]] = new Annotation(preds[i] - .getCharAt(j) - + "", "", preds[i].getCharAt(j), value); + annotations[gapmap[delMap[j]]] = new Annotation( + preds[i].getCharAt(j) + "", "", + preds[i].getCharAt(j), value); } } } @@ -146,9 +146,8 @@ public class JnetAnnotationMaker { for (int j = 0; j < width; j++) { - annotations[gapmap[delMap[j]]] = new Annotation(preds[i] - .getCharAt(j) - + "", "", ' ', 0); + annotations[gapmap[delMap[j]]] = new Annotation( + preds[i].getCharAt(j) + "", "", ' ', 0); } } }