X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FJnetAnnotationMaker.java;h=dabd8ca219b6a3a2ea40e2dae2df0e903ed56470;hb=5e57181bca4cbbdd3ff8f7f67aaa7bd22ffc710b;hp=d7e901e582e106897b3216b4155d3cd855619bdf;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git

diff --git a/src/jalview/io/JnetAnnotationMaker.java b/src/jalview/io/JnetAnnotationMaker.java
index d7e901e..dabd8ca 100755
--- a/src/jalview/io/JnetAnnotationMaker.java
+++ b/src/jalview/io/JnetAnnotationMaker.java
@@ -1,19 +1,22 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.io;
 
@@ -95,8 +98,8 @@ public class JnetAnnotationMaker
           {
             for (int j = 0; j < width; j++)
             {
-              annotations[gapmap[j]] = new Annotation("", "", preds[i]
-                      .getCharAt(j), 0);
+              annotations[gapmap[j]] = new Annotation("", "",
+                      preds[i].getCharAt(j), 0);
             }
           }
           else
@@ -126,9 +129,9 @@ public class JnetAnnotationMaker
             {
               float value = new Float(preds[i].getCharAt(j) + "")
                       .floatValue();
-              annotations[gapmap[delMap[j]]] = new Annotation(preds[i]
-                      .getCharAt(j)
-                      + "", "", preds[i].getCharAt(j), value);
+              annotations[gapmap[delMap[j]]] = new Annotation(
+                      preds[i].getCharAt(j) + "", "",
+                      preds[i].getCharAt(j), value);
             }
           }
         }
@@ -146,9 +149,8 @@ public class JnetAnnotationMaker
           {
             for (int j = 0; j < width; j++)
             {
-              annotations[gapmap[delMap[j]]] = new Annotation(preds[i]
-                      .getCharAt(j)
-                      + "", "", ' ', 0);
+              annotations[gapmap[delMap[j]]] = new Annotation(
+                      preds[i].getCharAt(j) + "", "", ' ', 0);
             }
           }
         }