X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FModellerDescription.java;h=300a9ba2eecba039f26526e2bc9b99ef699d6822;hb=383df9f8b9361eec5ea779a22ceecc90dc7e6960;hp=62e1fbe25702b7e26dbc0584713b040452ca804d;hpb=d98d507e3c4793e87c7f25551dd184255b3070d5;p=jalview.git

diff --git a/src/jalview/io/ModellerDescription.java b/src/jalview/io/ModellerDescription.java
index 62e1fbe..300a9ba 100755
--- a/src/jalview/io/ModellerDescription.java
+++ b/src/jalview/io/ModellerDescription.java
@@ -224,19 +224,17 @@ public class ModellerDescription
       if (seq.getDatasetSequence() != null &&
           seq.getDatasetSequence().getDBRef() != null)
       {
-        Vector dbr = seq.getDatasetSequence().getDBRef();
+        jalview.datamodel.DBRefEntry [] dbr = seq.getDatasetSequence().getDBRef();
         int i, j;
-        for (i = 0, j = dbr.size(); i < j; i++)
+        for (i = 0, j = dbr.length; i < j; i++)
         {
-          jalview.datamodel.DBRefEntry dref = (jalview.datamodel.DBRefEntry)
-              dbr.elementAt(i);
-          if (dref != null)
+          if (dbr[i] != null)
           {
             // JBPNote PDB dbRefEntry needs properties to propagate onto ModellerField
             // JBPNote Need to get info from the user about whether the sequence is the one being modelled, or if it is a template.
-            if (dref.getSource().equals("PDB"))
+            if (dbr[i].getSource().equals(jalview.datamodel.DBRefSource.PDB))
             {
-              fields.put(Fields[LOCALID], dref.getAccessionId());
+              fields.put(Fields[LOCALID], dbr[i].getAccessionId());
               t = 2;
               break;
             }