X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FModellerDescription.java;h=497671967a9fcd407c4956d13223101a3b693f7d;hb=c0501eaa85c0594f9275766f64de8ea44a59c368;hp=48a69034ee8eb9bf7cc54ba426b9a6242b46fd96;hpb=304e64fb34b32659be1bbfd39fb4e15b2f79586e;p=jalview.git

diff --git a/src/jalview/io/ModellerDescription.java b/src/jalview/io/ModellerDescription.java
index 48a6903..4976719 100755
--- a/src/jalview/io/ModellerDescription.java
+++ b/src/jalview/io/ModellerDescription.java
@@ -23,6 +23,7 @@ package jalview.io;
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.SequenceI;
 import jalview.util.Platform;
+import jalview.bin.Console;
 
 import java.util.List;
 
@@ -105,11 +106,11 @@ public class ModellerDescription
                     .newRegex("\\s*((([-0-9]+).?)|FIRST|LAST|@)", null)
             : VALIDATION_REGEX);
   }
-
   private resCode validResidueCode(String field)
   {
     Integer val = null;
     Regex r = getRegex();
+
     if (!r.search(field))
     {
       return null; // invalid
@@ -119,7 +120,7 @@ public class ModellerDescription
     {
       value = r.stringMatched(1);
     }
-    // jalview.bin.Cache.log.debug("from '" + field + "' matched '" + value +
+    // jalview.bin.Console.debug("from '" + field + "' matched '" + value +
     // "'");
     try
     {
@@ -174,7 +175,7 @@ public class ModellerDescription
                 }
                 else
                 {
-                  // jalview.bin.Cache.log.debug(
+                  // jalview.bin.Console.debug(
                   // "Ignoring non-Modeller description: invalid integer-like
                   // field '" + field + "'");
                   type = -1; /* invalid field! - throw the FieldSet away */