X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FModellerDescription.java;h=a7a1efac04870066a37975a6b7cda801b7df17ec;hb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;hp=60433a8a6539d3751cfca475bcf1061751c019e8;hpb=a8f483d04205bb8273ee311c12968b7e86d205fa;p=jalview.git diff --git a/src/jalview/io/ModellerDescription.java b/src/jalview/io/ModellerDescription.java index 60433a8..a7a1efa 100755 --- a/src/jalview/io/ModellerDescription.java +++ b/src/jalview/io/ModellerDescription.java @@ -1,24 +1,26 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9) + * Copyright (C) 2015 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.io; -import jalview.datamodel.*; +import jalview.datamodel.SequenceI; public class ModellerDescription { @@ -27,13 +29,12 @@ public class ModellerDescription * single line, and sequence start/end and other properties. See PIRFile IO * for its use. */ - final String[] seqTypes = - { "sequence", "structure", "structureX", "structureN" }; + final String[] seqTypes = { "sequence", "structure", "structureX", + "structureN" }; - final String[] Fields = - { "objectType", "objectId", "startField", "startCode", "endField", - "endCode", "description1", "description2", "resolutionField", - "tailField" }; + final String[] Fields = { "objectType", "objectId", "startField", + "startCode", "endField", "endCode", "description1", "description2", + "resolutionField", "tailField" }; final int TYPE = 0; @@ -58,11 +59,9 @@ public class ModellerDescription /** * 0 is free text or empty 1 is something that parses to an integer, or \@ */ - final int Types[] = - { 0, 0, 1, 0, 1, 0, 0, 0, 0, 0 }; + final int Types[] = { 0, 0, 1, 0, 1, 0, 0, 0, 0, 0 }; - final char Padding[] = - { ' ', ' ', ' ', '.', ' ', '.', '.', '.', '.', '.' }; + final char Padding[] = { ' ', ' ', ' ', '.', ' ', '.', '.', '.', '.', '.' }; java.util.Hashtable fields = new java.util.Hashtable();