X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FScoreMatrixFile.java;h=6b2f891be5f4c47e771a5037b4dcb7380bd9b112;hb=2b2c9e1a88930585de0b5c205e4ae6f0174440d2;hp=3a7ff4fc6d795e48efaaf811ce5bdba99bd10d46;hpb=a862a922bf20918fc3f5066ac92e4c69da07e105;p=jalview.git

diff --git a/src/jalview/io/ScoreMatrixFile.java b/src/jalview/io/ScoreMatrixFile.java
index 3a7ff4f..6b2f891 100644
--- a/src/jalview/io/ScoreMatrixFile.java
+++ b/src/jalview/io/ScoreMatrixFile.java
@@ -255,8 +255,7 @@ public class ScoreMatrixFile extends AlignFile implements
       }
     }
 
-    ScoreMatrix sm = new ScoreMatrix(name, alphabet, scores);
-    sm.setDescription(description);
+    ScoreMatrix sm = new ScoreMatrix(name, description, alphabet, scores);
     matrixName = name;
 
     return sm;