X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FSequenceAnnotationReport.java;h=62b723dba3425af6fd5f6500c79e97b9b79b0793;hb=9d2408483e451285fd555c3cd6e0273977acbaa7;hp=8e4e78305e2c41e01d172b21eee8babf757cf1c5;hpb=65740880573a48adc758bec3939ece9d9ae104dd;p=jalview.git
diff --git a/src/jalview/io/SequenceAnnotationReport.java b/src/jalview/io/SequenceAnnotationReport.java
index 8e4e783..62b723d 100644
--- a/src/jalview/io/SequenceAnnotationReport.java
+++ b/src/jalview/io/SequenceAnnotationReport.java
@@ -20,6 +20,8 @@
*/
package jalview.io;
+import java.util.Locale;
+
import java.util.Collection;
import java.util.Comparator;
import java.util.LinkedHashMap;
@@ -273,7 +275,7 @@ public class SequenceAnnotationReport
* truncate overlong descriptions unless they contain an href
* before the truncation point (as truncation could leave corrupted html)
*/
- int linkindex = description.toLowerCase().indexOf(" -1
&& linkindex < MAX_DESCRIPTION_LENGTH;
if (description.length() > MAX_DESCRIPTION_LENGTH && !hasLink)
@@ -400,8 +402,8 @@ public class SequenceAnnotationReport
+ "\" target=\""
+ urllink.get(0)
+ "\">"
- + (urllink.get(0).toLowerCase()
- .equals(urllink.get(1).toLowerCase()) ? urllink
+ + (urllink.get(0).toLowerCase(Locale.ROOT)
+ .equals(urllink.get(1).toLowerCase(Locale.ROOT)) ? urllink
.get(0) : (urllink.get(0) + ":" + urllink
.get(1)))
+ "
");