X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FSequenceAnnotationReport.java;h=dca53e1cb913df6fdcc2e8d8fffe801fbc94000d;hb=49db0dff1da16c3355b43a41498c1fc93ef47e91;hp=6adc41987f5ef9fed6ea66969692e0f5935881a7;hpb=dce490b7c7c8f2c2021f7dd93ba126af0c6eaf43;p=jalview.git diff --git a/src/jalview/io/SequenceAnnotationReport.java b/src/jalview/io/SequenceAnnotationReport.java index 6adc419..dca53e1 100644 --- a/src/jalview/io/SequenceAnnotationReport.java +++ b/src/jalview/io/SequenceAnnotationReport.java @@ -20,6 +20,8 @@ */ package jalview.io; +import java.util.Locale; + import java.util.Collection; import java.util.Comparator; import java.util.LinkedHashMap; @@ -274,7 +276,7 @@ public class SequenceAnnotationReport * truncate overlong descriptions unless they contain an href * before the truncation point (as truncation could leave corrupted html) */ - int linkindex = description.toLowerCase().indexOf(" -1 && linkindex < MAX_DESCRIPTION_LENGTH; if ( @@ -403,8 +405,8 @@ public class SequenceAnnotationReport + "\" target=\"" + urllink.get(0) + "\">" - + (urllink.get(0).toLowerCase() - .equals(urllink.get(1).toLowerCase()) ? urllink + + (urllink.get(0).toLowerCase(Locale.ROOT) + .equals(urllink.get(1).toLowerCase(Locale.ROOT)) ? urllink .get(0) : (urllink.get(0) + ":" + urllink .get(1))) + "
");