X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FTCoffeeScoreFile.java;h=52751e9ad47ccff3dbcf87588d03f9d01e63abdb;hb=3fdc889794e3566af57628f0b6a308eb23886f96;hp=7e963d56c7487674e5e9db6420b859945970aac0;hpb=c945c9641de88cad01b09b3db19e45667dfe751e;p=jalview.git

diff --git a/src/jalview/io/TCoffeeScoreFile.java b/src/jalview/io/TCoffeeScoreFile.java
index 7e963d5..52751e9 100644
--- a/src/jalview/io/TCoffeeScoreFile.java
+++ b/src/jalview/io/TCoffeeScoreFile.java
@@ -601,7 +601,7 @@ public class TCoffeeScoreFile extends AlignFile
           annotations[j] = null;
           if (val > 0)
           {
-            System.err.println(
+            jalview.bin.Console.errPrintln(
                     "Warning: non-zero value for positional T-COFFEE score for gap at "
                             + j + " in sequence " + s.getName());
           }