X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FTCoffeeScoreFile.java;h=c3ec9514f77a99b68700071947b5d6be16d236ca;hb=35ce4609cc8a776b1d85a1f2c2c70aaa106c1a3b;hp=07d7be4c1cea172765e32a420837b6a2501def56;hpb=37de9310bec3501cbc6381e0c3dcb282fcaad812;p=jalview.git

diff --git a/src/jalview/io/TCoffeeScoreFile.java b/src/jalview/io/TCoffeeScoreFile.java
index 07d7be4..c3ec951 100644
--- a/src/jalview/io/TCoffeeScoreFile.java
+++ b/src/jalview/io/TCoffeeScoreFile.java
@@ -91,9 +91,10 @@ import java.util.regex.Pattern;
  */
 public class TCoffeeScoreFile extends AlignFile
 {
-  public TCoffeeScoreFile(String inFile, String type) throws IOException
+  public TCoffeeScoreFile(String inFile, DataSourceType fileSourceType)
+          throws IOException
   {
-    super(inFile, type);
+    super(inFile, fileSourceType);
 
   }
 
@@ -213,6 +214,7 @@ public class TCoffeeScoreFile extends AlignFile
     return result;
   }
 
+  @Override
   public void parse() throws IOException
   {
     /*
@@ -643,7 +645,7 @@ public class TCoffeeScoreFile extends AlignFile
   }
 
   @Override
-  public String print()
+  public String print(SequenceI[] sqs, boolean jvsuffix)
   {
     // TODO Auto-generated method stub
     return "Not valid.";