X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FWSWUBlastClient.java;h=abfd1b2c8c80b94442d214d4d38034fdd687fda6;hb=c19d2a91ca05e052e3408bf5852d88eb5d0608f1;hp=df15b5e5a7abb42bc1ea4f2859a41ce64d893171;hpb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;p=jalview.git

diff --git a/src/jalview/io/WSWUBlastClient.java b/src/jalview/io/WSWUBlastClient.java
index df15b5e..abfd1b2 100755
--- a/src/jalview/io/WSWUBlastClient.java
+++ b/src/jalview/io/WSWUBlastClient.java
@@ -1,32 +1,48 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.io;
 
-import java.util.*;
+import jalview.analysis.AlignSeq;
+import jalview.datamodel.AlignmentI;
+import jalview.datamodel.DBRefEntry;
+import jalview.datamodel.Sequence;
+import jalview.gui.AlignmentPanel;
+import jalview.gui.CutAndPasteTransfer;
+import jalview.gui.Desktop;
+import jalview.util.MessageManager;
 
-import javax.swing.*;
+import java.util.ArrayList;
+import java.util.Enumeration;
+import java.util.StringTokenizer;
+import java.util.Vector;
 
-import jalview.analysis.*;
-import jalview.datamodel.*;
-import jalview.gui.*;
-import jalview.util.MessageManager;
-import uk.ac.ebi.www.*;
+import javax.swing.ImageIcon;
+import javax.swing.JOptionPane;
+
+import uk.ac.ebi.www.Data;
+import uk.ac.ebi.www.InputParams;
+import uk.ac.ebi.www.WSFile;
+import uk.ac.ebi.www.WSWUBlast;
+import uk.ac.ebi.www.WSWUBlastService;
+import uk.ac.ebi.www.WSWUBlastServiceLocator;
 
 /**
  * DOCUMENT ME!
@@ -58,10 +74,12 @@ public class WSWUBlastClient
   {
     this.ap = ap;
     this.al = al;
-    output.setText(MessageManager.getString("label.wswublast_client_credits"));
+    output.setText(MessageManager
+            .getString("label.wswublast_client_credits"));
 
-    Desktop.addInternalFrame(output,
-            MessageManager.getString("label.blasting_for_unidentified_sequence"), 800, 300);
+    Desktop.addInternalFrame(output, MessageManager
+            .getString("label.blasting_for_unidentified_sequence"), 800,
+            300);
 
     for (int i = 0; i < ids.size(); i++)
     {
@@ -118,8 +136,7 @@ public class WSWUBlastClient
             {
               maxFound = value;
               buffer.append(" " + id2 + " " + value + "%; ");
-              suggestedIds.addElement(new Object[]
-              { seq, id2 });
+              suggestedIds.addElement(new Object[] { seq, id2 });
             }
           }
         }
@@ -204,8 +221,9 @@ public class WSWUBlastClient
           imageIndex++;
           imageIndex %= 9;
           output.setFrameIcon(imageIcon[imageIndex]);
-          output.setTitle("BLASTing for unidentified sequences - "
-                  + jobsRunning + " jobs running.");
+          output.setTitle(MessageManager.formatMessage(
+                  "label.blasting_for_unidentified_sequence_jobs_running",
+                  new String[] { Integer.valueOf(jobsRunning).toString() }));
         } catch (Exception ex)
         {
         }