X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FWSWUBlastClient.java;h=d94d0214f98054584a6bbc6061fbda8cfcc1c179;hb=838e4f91d4a53dd315640dbc9ff6ef7a815ee576;hp=41b8f9429e7e6bb868155c1315a81abe4f6a94ad;hpb=ab43013b7e357b84b4abade0dba949668dfb2a0e;p=jalview.git diff --git a/src/jalview/io/WSWUBlastClient.java b/src/jalview/io/WSWUBlastClient.java index 41b8f94..d94d021 100755 --- a/src/jalview/io/WSWUBlastClient.java +++ b/src/jalview/io/WSWUBlastClient.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1) + * Copyright (C) 2015 The Jalview Authors * * This file is part of Jalview. * @@ -20,15 +20,29 @@ */ package jalview.io; -import java.util.*; +import jalview.analysis.AlignSeq; +import jalview.datamodel.AlignmentI; +import jalview.datamodel.DBRefEntry; +import jalview.datamodel.Sequence; +import jalview.gui.AlignmentPanel; +import jalview.gui.CutAndPasteTransfer; +import jalview.gui.Desktop; +import jalview.util.MessageManager; -import javax.swing.*; +import java.util.ArrayList; +import java.util.Enumeration; +import java.util.StringTokenizer; +import java.util.Vector; -import jalview.analysis.*; -import jalview.datamodel.*; -import jalview.gui.*; -import jalview.util.MessageManager; -import uk.ac.ebi.www.*; +import javax.swing.ImageIcon; +import javax.swing.JOptionPane; + +import uk.ac.ebi.www.Data; +import uk.ac.ebi.www.InputParams; +import uk.ac.ebi.www.WSFile; +import uk.ac.ebi.www.WSWUBlast; +import uk.ac.ebi.www.WSWUBlastService; +import uk.ac.ebi.www.WSWUBlastServiceLocator; /** * DOCUMENT ME! @@ -122,8 +136,7 @@ public class WSWUBlastClient { maxFound = value; buffer.append(" " + id2 + " " + value + "%; "); - suggestedIds.addElement(new Object[] - { seq, id2 }); + suggestedIds.addElement(new Object[] { seq, id2 }); } } } @@ -208,7 +221,9 @@ public class WSWUBlastClient imageIndex++; imageIndex %= 9; output.setFrameIcon(imageIcon[imageIndex]); - output.setTitle(MessageManager.formatMessage("label.blasting_for_unidentified_sequence_jobs_running", new String[]{Integer.valueOf(jobsRunning).toString()})); + output.setTitle(MessageManager.formatMessage( + "label.blasting_for_unidentified_sequence_jobs_running", + new String[] { Integer.valueOf(jobsRunning).toString() })); } catch (Exception ex) { }