X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FWSWUBlastClient.java;h=e2910eef143f1a819c52cdffb4caaa3b2696c375;hb=3d9d1f6c1c1da3b2657f9ebb95430d0bc8dde873;hp=6a06f909fc50b86a2e301c0537cd7943700db37d;hpb=174230b4233d9ce80f94527768d2cd2f76da11ab;p=jalview.git

diff --git a/src/jalview/io/WSWUBlastClient.java b/src/jalview/io/WSWUBlastClient.java
index 6a06f90..e2910ee 100755
--- a/src/jalview/io/WSWUBlastClient.java
+++ b/src/jalview/io/WSWUBlastClient.java
@@ -286,7 +286,7 @@ public class WSWUBlastClient
               Data inputs[] = new Data[1];
               Data input= new Data();
               input.setType("sequence");
-              input.setContent(AlignSeq.extractGaps("-. ",sequence.getSequence()));
+              input.setContent(AlignSeq.extractGaps("-. ",sequence.getSequenceAsString()));
               inputs[0]=input;
 
               WSWUBlastService service = new WSWUBlastServiceLocator();