X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FWSWUBlastClient.java;h=e2910eef143f1a819c52cdffb4caaa3b2696c375;hb=dd74fc4938723fe5ec48d4e5fdcfbe58ac42a48d;hp=782e0ed444070313abe57c5b5a608971f0f214c0;hpb=0d6e36143a2d7471edb7ef386d0b79095e0cd63e;p=jalview.git

diff --git a/src/jalview/io/WSWUBlastClient.java b/src/jalview/io/WSWUBlastClient.java
index 782e0ed..e2910ee 100755
--- a/src/jalview/io/WSWUBlastClient.java
+++ b/src/jalview/io/WSWUBlastClient.java
@@ -1,6 +1,6 @@
 /*
 * Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+* Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
 *
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU General Public License
@@ -286,7 +286,7 @@ public class WSWUBlastClient
               Data inputs[] = new Data[1];
               Data input= new Data();
               input.setType("sequence");
-              input.setContent(AlignSeq.extractGaps("-. ",sequence.getSequence()));
+              input.setContent(AlignSeq.extractGaps("-. ",sequence.getSequenceAsString()));
               inputs[0]=input;
 
               WSWUBlastService service = new WSWUBlastServiceLocator();