X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fvamsas%2FDatasetsequence.java;h=9db7a8e1d430c7e060df9744bd1245889ff7fe4e;hb=ea7b9666447dea727e9d607de3694cfe27bc811e;hp=6b449ee7aff9c32736440d94ef69d297f12c5453;hpb=47168f025aefdaa044802bd5f8f510ffe43a4808;p=jalview.git diff --git a/src/jalview/io/vamsas/Datasetsequence.java b/src/jalview/io/vamsas/Datasetsequence.java index 6b449ee..9db7a8e 100644 --- a/src/jalview/io/vamsas/Datasetsequence.java +++ b/src/jalview/io/vamsas/Datasetsequence.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -23,6 +23,7 @@ package jalview.io.vamsas; import jalview.datamodel.DBRefEntry; import jalview.datamodel.SequenceI; import jalview.io.VamsasAppDatastore; + import uk.ac.vamsas.objects.core.DataSet; import uk.ac.vamsas.objects.core.DbRef; import uk.ac.vamsas.objects.core.Sequence; @@ -174,10 +175,10 @@ public class Datasetsequence extends DatastoreItem boolean modifiedthedoc = false; SequenceI sq = (SequenceI) jvobj; - if (sq.getDatasetSequence() == null && sq.getDBRef() != null) + if (sq.getDatasetSequence() == null && sq.getDBRefs() != null) { // only sync database references for dataset sequences - DBRefEntry[] entries = sq.getDBRef(); + DBRefEntry[] entries = sq.getDBRefs(); // jalview.datamodel.DBRefEntry dbentry; for (int db = 0; db < entries.length; db++) {