X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fvamsas%2FDbref.java;h=e9f44d04c8026b4a8fed11544ca89ce935a7ae06;hb=03bc8848382795bda548083f0bc3202dfe6a9b8b;hp=0c8ff0974dc39ce76b9bc410f839b6981bb2089c;hpb=a1984b1c8c273ed33c7ce9283039f4027dcae2de;p=jalview.git

diff --git a/src/jalview/io/vamsas/Dbref.java b/src/jalview/io/vamsas/Dbref.java
index 0c8ff09..e9f44d0 100644
--- a/src/jalview/io/vamsas/Dbref.java
+++ b/src/jalview/io/vamsas/Dbref.java
@@ -20,7 +20,7 @@
  */
 package jalview.io.vamsas;
 
-import jalview.bin.Cache;
+import jalview.bin.Console;
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.SequenceI;
 import jalview.io.VamsasAppDatastore;
@@ -93,7 +93,7 @@ public class Dbref extends Rangetype
     }
     else
     {
-      Cache.debug(
+      Console.debug(
               "Ignoring mapless DbRef.Map " + jvobj.getSrcAccString());
     }
 
@@ -159,8 +159,8 @@ public class Dbref extends Rangetype
       // TODO: Jalview ignores all the other maps
       if (vobj.getMapCount() > 1)
       {
-        Cache.debug("Ignoring additional mappings on DbRef: "
-                        + jvobj.getSource() + ":" + jvobj.getAccessionId());
+        Console.debug("Ignoring additional mappings on DbRef: "
+                + jvobj.getSource() + ":" + jvobj.getAccessionId());
       }
       jalview.datamodel.Mapping mp = new jalview.datamodel.Mapping(
               parsemapType(vobj.getMap(0)));
@@ -175,8 +175,8 @@ public class Dbref extends Rangetype
   {
     DbRef vobj = (DbRef) this.vobj;
     DBRefEntry jvobj = (DBRefEntry) this.jvobj;
-    Cache.debug("Conflict in dbentry update for " + vobj.getAccessionId()
-                    + vobj.getSource() + " " + vobj.getVorbaId());
+    Console.debug("Conflict in dbentry update for " + vobj.getAccessionId()
+            + vobj.getSource() + " " + vobj.getVorbaId());
     // TODO Auto-generated method stub
 
   }
@@ -194,8 +194,8 @@ public class Dbref extends Rangetype
       // TODO: Jalview ignores all the other maps
       if (vobj.getMapCount() > 1)
       {
-        Cache.debug("Ignoring additional mappings on DbRef: "
-                        + jvobj.getSource() + ":" + jvobj.getAccessionId());
+        Console.debug("Ignoring additional mappings on DbRef: "
+                + jvobj.getSource() + ":" + jvobj.getAccessionId());
       }
       jalview.datamodel.Mapping mp = new jalview.datamodel.Mapping(
               parsemapType(vobj.getMap(0)));
@@ -228,7 +228,7 @@ public class Dbref extends Rangetype
       }
       else
       {
-        Cache.debug(
+        Console.debug(
                 "Ignoring mapless DbRef.Map " + jvobj.getSrcAccString());
       }
     }