X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjavascript%2FMouseOverStructureListener.java;fp=src%2Fjalview%2Fjavascript%2FMouseOverStructureListener.java;h=176c881b36707e37de04529640852f44651a9fba;hb=15335b83310784537f6c1b9c20d2c1ea2f57bcfc;hp=7f833e7fa4e0887b6350d952ad990c6c92c72ac2;hpb=202bfccc5800bb71878437dc749e9c8c15b4375e;p=jalview.git

diff --git a/src/jalview/javascript/MouseOverStructureListener.java b/src/jalview/javascript/MouseOverStructureListener.java
index 7f833e7..176c881 100644
--- a/src/jalview/javascript/MouseOverStructureListener.java
+++ b/src/jalview/javascript/MouseOverStructureListener.java
@@ -90,14 +90,13 @@ public class MouseOverStructureListener extends JSFunctionExec implements
     {
       for (int i = 0; i < modelSet.length; i++)
       {
-        // ? leave file names 'as is' to match StructureMapping.pdbfile
-        // modelSet[i] = resolveModelFile(modelSet[i]);
+        modelSet[i] = resolveModelFile(modelSet[i]);
       }
     }
   }
 
   /**
-   * Returns the first out of file, file prefixed by document base, or file
+   * Returns the first out of: file, file prefixed by document base, or file
    * prefixed by codebase which can be resolved to a valid URL. If none can,
    * returns the input parameter value.
    * 
@@ -105,6 +104,7 @@ public class MouseOverStructureListener extends JSFunctionExec implements
    */
   public String resolveModelFile(String file)
   {
+    // TODO reuse JalviewLite.LoadingThread.addProtocol instead
     if (isValidUrl(file))
     {
       return file;