X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjavascript%2FMouseOverStructureListener.java;h=6d366d067d319d931abfdff979911806d9931f0f;hb=799c26111d6936a2e70cb5f1fd7d7312311e6db9;hp=35c78603080e3610f3b108d347660bb3223267c2;hpb=3bff70075d04a89d91e6b317a4a3bdb007f32d5f;p=jalview.git

diff --git a/src/jalview/javascript/MouseOverStructureListener.java b/src/jalview/javascript/MouseOverStructureListener.java
index 35c7860..6d366d0 100644
--- a/src/jalview/javascript/MouseOverStructureListener.java
+++ b/src/jalview/javascript/MouseOverStructureListener.java
@@ -222,7 +222,7 @@ public class MouseOverStructureListener extends JSFunctionExec implements
       ArrayList<String> pdbfn = new ArrayList<String>();
       StructureMappingcommandSet[] colcommands = JmolCommands
               .getColourBySequenceCommand(ssm, modelSet, sequence, sr, fr,
-                      ((AlignmentViewPanel) source).getAlignment());
+                      ((AlignmentViewPanel) source).getAlignViewport());
       if (colcommands == null)
       {
         return;
@@ -298,7 +298,8 @@ public class MouseOverStructureListener extends JSFunctionExec implements
     return _listenerfn;
   }
 
-  public void finalise()
+  @Override
+  public void finalize() throws Throwable
   {
     jvlite = null;
     super.finalize();