X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGPCAPanel.java;h=0bc6cac9cfdaa0cb4b064f0ec88a71ff3d947677;hb=4f094851cd2247ea2d982e7829a6f5b663042573;hp=3fe76ac6142571ca23ba01ca6e8d6de6fc24d815;hpb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;p=jalview.git

diff --git a/src/jalview/jbgui/GPCAPanel.java b/src/jalview/jbgui/GPCAPanel.java
index 3fe76ac..0bc6cac 100755
--- a/src/jalview/jbgui/GPCAPanel.java
+++ b/src/jalview/jbgui/GPCAPanel.java
@@ -1,30 +1,45 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.jbgui;
 
 import jalview.util.MessageManager;
 
-import java.awt.*;
-import java.awt.event.*;
-
-import javax.swing.*;
-import javax.swing.event.*;
+import java.awt.BorderLayout;
+import java.awt.Color;
+import java.awt.FlowLayout;
+import java.awt.GridLayout;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+
+import javax.swing.JButton;
+import javax.swing.JCheckBoxMenuItem;
+import javax.swing.JComboBox;
+import javax.swing.JInternalFrame;
+import javax.swing.JLabel;
+import javax.swing.JMenu;
+import javax.swing.JMenuBar;
+import javax.swing.JMenuItem;
+import javax.swing.JPanel;
+import javax.swing.event.MenuEvent;
+import javax.swing.event.MenuListener;
 
 public class GPCAPanel extends JInternalFrame
 {
@@ -53,7 +68,7 @@ public class GPCAPanel extends JInternalFrame
   JMenu fileMenu = new JMenu();
 
   JMenu saveMenu = new JMenu();
-  
+
   protected JMenu scoreMatrixMenu = new JMenu();
 
   JMenuItem eps = new JMenuItem();
@@ -192,7 +207,8 @@ public class GPCAPanel extends JInternalFrame
         outputPoints_actionPerformed(e);
       }
     });
-    outputProjPoints.setText(MessageManager.getString("label.output_transformed_points") + "...");
+    outputProjPoints.setText(MessageManager
+            .getString("label.output_transformed_points"));
     outputProjPoints.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -223,7 +239,8 @@ public class GPCAPanel extends JInternalFrame
       {
       }
     });
-    scoreMatrixMenu.setText(MessageManager.getString("label.select_score_model"));
+    scoreMatrixMenu.setText(MessageManager
+            .getString("label.select_score_model"));
     scoreMatrixMenu.addMenuListener(new MenuListener()
     {
       public void menuSelected(MenuEvent e)
@@ -248,7 +265,7 @@ public class GPCAPanel extends JInternalFrame
       }
     });
     print.setText(MessageManager.getString("action.print"));
-    bgcolour.setText(MessageManager.getString("label.background_colour") + "...");
+    bgcolour.setText(MessageManager.getString("action.background_colour"));
     bgcolour.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -264,9 +281,11 @@ public class GPCAPanel extends JInternalFrame
         originalSeqData_actionPerformed(e);
       }
     });
-    associateViewsMenu.setText(MessageManager.getString("label.associate_nodes_with"));
+    associateViewsMenu.setText(MessageManager
+            .getString("label.associate_nodes_with"));
     calcSettings.setText(MessageManager.getString("action.change_params"));
-    nuclSetting.setText(MessageManager.getString("label.nucleotide_matrix"));
+    nuclSetting
+            .setText(MessageManager.getString("label.nucleotide_matrix"));
     protSetting.setText(MessageManager.getString("label.protein_matrix"));
     nuclSetting.addActionListener(new ActionListener()
     {
@@ -286,7 +305,8 @@ public class GPCAPanel extends JInternalFrame
         protSetting_actionPerfomed(arg0);
       }
     });
-    jvVersionSetting.setText(MessageManager.getString("label.jalview_pca_calculation"));
+    jvVersionSetting.setText(MessageManager
+            .getString("label.jalview_pca_calculation"));
     jvVersionSetting.addActionListener(new ActionListener()
     {
       @Override
@@ -334,7 +354,7 @@ public class GPCAPanel extends JInternalFrame
   protected void scoreMatrix_menuSelected()
   {
     // TODO Auto-generated method stub
-    
+
   }
 
   protected void resetButton_actionPerformed(ActionEvent e)