X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGPCAPanel.java;h=f57845daf8ce2bd7d0debbca156e078fc788530a;hb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;hp=62234bfb049b587304ef781006235b111ea7b0dd;hpb=797df64fa2a0a30773d0f48f5494d4155e5a8be3;p=jalview.git
diff --git a/src/jalview/jbgui/GPCAPanel.java b/src/jalview/jbgui/GPCAPanel.java
index 62234bf..f57845d 100755
--- a/src/jalview/jbgui/GPCAPanel.java
+++ b/src/jalview/jbgui/GPCAPanel.java
@@ -1,27 +1,45 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- *
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.jbgui;
-import java.awt.*;
-import java.awt.event.*;
-
-import javax.swing.*;
-import javax.swing.event.*;
+import jalview.util.MessageManager;
+
+import java.awt.BorderLayout;
+import java.awt.Color;
+import java.awt.FlowLayout;
+import java.awt.GridLayout;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+
+import javax.swing.JButton;
+import javax.swing.JCheckBoxMenuItem;
+import javax.swing.JComboBox;
+import javax.swing.JInternalFrame;
+import javax.swing.JLabel;
+import javax.swing.JMenu;
+import javax.swing.JMenuBar;
+import javax.swing.JMenuItem;
+import javax.swing.JPanel;
+import javax.swing.event.MenuEvent;
+import javax.swing.event.MenuListener;
public class GPCAPanel extends JInternalFrame
{
@@ -39,6 +57,8 @@ public class GPCAPanel extends JInternalFrame
protected JComboBox zCombobox = new JComboBox();
+ protected JButton resetButton = new JButton();
+
FlowLayout flowLayout1 = new FlowLayout();
BorderLayout borderLayout1 = new BorderLayout();
@@ -49,6 +69,8 @@ public class GPCAPanel extends JInternalFrame
JMenu saveMenu = new JMenu();
+ protected JMenu scoreMatrixMenu = new JMenu();
+
JMenuItem eps = new JMenuItem();
JMenuItem png = new JMenuItem();
@@ -71,6 +93,20 @@ public class GPCAPanel extends JInternalFrame
protected JMenu associateViewsMenu = new JMenu();
+ protected JMenu calcSettings = new JMenu();
+
+ protected JCheckBoxMenuItem nuclSetting = new JCheckBoxMenuItem();
+
+ protected JCheckBoxMenuItem protSetting = new JCheckBoxMenuItem();
+
+ protected JCheckBoxMenuItem jvVersionSetting = new JCheckBoxMenuItem();
+
+ protected JLabel statusBar = new JLabel();
+
+ protected GridLayout statusPanelLayout = new GridLayout();
+
+ protected JPanel statusPanel = new JPanel();
+
public GPCAPanel()
{
try
@@ -127,8 +163,18 @@ public class GPCAPanel extends JInternalFrame
xCombobox_actionPerformed(e);
}
});
- fileMenu.setText("File");
- saveMenu.setText("Save as");
+ resetButton.setFont(new java.awt.Font("Verdana", 0, 12));
+ resetButton.setText(MessageManager.getString("action.reset"));
+ resetButton.addActionListener(new java.awt.event.ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ resetButton_actionPerformed(e);
+ }
+ });
+ fileMenu.setText(MessageManager.getString("action.file"));
+ saveMenu.setText(MessageManager.getString("action.save_as"));
eps.setText("EPS");
eps.addActionListener(new ActionListener()
{
@@ -145,7 +191,7 @@ public class GPCAPanel extends JInternalFrame
png_actionPerformed(e);
}
});
- outputValues.setText("Output Values...");
+ outputValues.setText(MessageManager.getString("label.output_values"));
outputValues.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
@@ -153,7 +199,7 @@ public class GPCAPanel extends JInternalFrame
outputValues_actionPerformed(e);
}
});
- outputPoints.setText("Output points...");
+ outputPoints.setText(MessageManager.getString("label.output_points"));
outputPoints.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
@@ -161,7 +207,8 @@ public class GPCAPanel extends JInternalFrame
outputPoints_actionPerformed(e);
}
});
- outputProjPoints.setText("Output transformed points...");
+ outputProjPoints.setText(MessageManager
+ .getString("label.output_transformed_points"));
outputProjPoints.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
@@ -176,7 +223,7 @@ public class GPCAPanel extends JInternalFrame
print_actionPerformed(e);
}
});
- viewMenu.setText("View");
+ viewMenu.setText(MessageManager.getString("action.view"));
viewMenu.addMenuListener(new MenuListener()
{
public void menuSelected(MenuEvent e)
@@ -192,7 +239,24 @@ public class GPCAPanel extends JInternalFrame
{
}
});
- showLabels.setText("Show Labels");
+ scoreMatrixMenu.setText(MessageManager
+ .getString("label.select_score_model"));
+ scoreMatrixMenu.addMenuListener(new MenuListener()
+ {
+ public void menuSelected(MenuEvent e)
+ {
+ scoreMatrix_menuSelected();
+ }
+
+ public void menuDeselected(MenuEvent e)
+ {
+ }
+
+ public void menuCanceled(MenuEvent e)
+ {
+ }
+ });
+ showLabels.setText(MessageManager.getString("label.show_labels"));
showLabels.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
@@ -200,8 +264,8 @@ public class GPCAPanel extends JInternalFrame
showLabels_actionPerformed(e);
}
});
- print.setText("Print");
- bgcolour.setText("Background Colour...");
+ print.setText(MessageManager.getString("action.print"));
+ bgcolour.setText(MessageManager.getString("action.background_colour"));
bgcolour.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
@@ -209,7 +273,7 @@ public class GPCAPanel extends JInternalFrame
bgcolour_actionPerformed(e);
}
});
- originalSeqData.setText("Input Data...");
+ originalSeqData.setText(MessageManager.getString("label.input_data"));
originalSeqData.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
@@ -217,16 +281,63 @@ public class GPCAPanel extends JInternalFrame
originalSeqData_actionPerformed(e);
}
});
- associateViewsMenu.setText("Associate Nodes With");
- this.getContentPane().add(jPanel2, BorderLayout.SOUTH);
+ associateViewsMenu.setText(MessageManager
+ .getString("label.associate_nodes_with"));
+ calcSettings.setText(MessageManager.getString("action.change_params"));
+ nuclSetting
+ .setText(MessageManager.getString("label.nucleotide_matrix"));
+ protSetting.setText(MessageManager.getString("label.protein_matrix"));
+ nuclSetting.addActionListener(new ActionListener()
+ {
+
+ @Override
+ public void actionPerformed(ActionEvent arg0)
+ {
+ nuclSetting_actionPerfomed(arg0);
+ }
+ });
+ protSetting.addActionListener(new ActionListener()
+ {
+
+ @Override
+ public void actionPerformed(ActionEvent arg0)
+ {
+ protSetting_actionPerfomed(arg0);
+ }
+ });
+ jvVersionSetting.setText(MessageManager
+ .getString("label.jalview_pca_calculation"));
+ jvVersionSetting.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent arg0)
+ {
+ jvVersionSetting_actionPerfomed(arg0);
+ }
+ });
+ calcSettings.add(jvVersionSetting);
+ calcSettings.add(nuclSetting);
+ calcSettings.add(protSetting);
+ calcSettings.add(scoreMatrixMenu);
+ statusPanel.setLayout(statusPanelLayout);
+ statusBar.setFont(new java.awt.Font("Verdana", 0, 12));
+ // statusPanel.setBackground(Color.lightGray);
+ // statusBar.setBackground(Color.lightGray);
+ // statusPanel.add(statusBar, null);
+ JPanel panelBar = new JPanel(new BorderLayout());
+ panelBar.add(jPanel2, BorderLayout.NORTH);
+ panelBar.add(statusPanel, BorderLayout.SOUTH);
+ this.getContentPane().add(panelBar, BorderLayout.SOUTH);
jPanel2.add(jLabel1, null);
jPanel2.add(xCombobox, null);
jPanel2.add(jLabel2, null);
jPanel2.add(yCombobox, null);
jPanel2.add(jLabel3, null);
jPanel2.add(zCombobox, null);
+ jPanel2.add(resetButton, null);
jMenuBar1.add(fileMenu);
jMenuBar1.add(viewMenu);
+ jMenuBar1.add(calcSettings);
fileMenu.add(saveMenu);
fileMenu.add(outputValues);
fileMenu.add(print);
@@ -240,6 +351,30 @@ public class GPCAPanel extends JInternalFrame
viewMenu.add(associateViewsMenu);
}
+ protected void scoreMatrix_menuSelected()
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ protected void resetButton_actionPerformed(ActionEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ protected void protSetting_actionPerfomed(ActionEvent arg0)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ protected void nuclSetting_actionPerfomed(ActionEvent arg0)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
protected void outputPoints_actionPerformed(ActionEvent e)
{
// TODO Auto-generated method stub
@@ -303,4 +438,10 @@ public class GPCAPanel extends JInternalFrame
{
}
+
+ protected void jvVersionSetting_actionPerfomed(ActionEvent arg0)
+ {
+ // TODO Auto-generated method stub
+
+ }
}