X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGStructureChooser.java;h=e571064b5e97e12c7573a011927e6e40b889b40d;hb=a31a02714259bddad8163062afc770e89114d0d4;hp=b79a7f763a285c963835350f6890886aed680f54;hpb=be32c14cd8e48fe0a207cd7030cb9cd46f894678;p=jalview.git diff --git a/src/jalview/jbgui/GStructureChooser.java b/src/jalview/jbgui/GStructureChooser.java index b79a7f7..e571064 100644 --- a/src/jalview/jbgui/GStructureChooser.java +++ b/src/jalview/jbgui/GStructureChooser.java @@ -22,18 +22,30 @@ package jalview.jbgui; import jalview.datamodel.SequenceI; +import jalview.fts.api.FTSDataColumnI; +import jalview.fts.core.FTSDataColumnPreferences; +import jalview.fts.core.FTSDataColumnPreferences.PreferenceSource; +import jalview.fts.service.pdb.PDBFTSRestClient; import jalview.gui.AlignmentPanel; import jalview.gui.Desktop; -import jalview.jbgui.PDBDocFieldPreferences.PreferenceSource; +import jalview.gui.JvSwingUtils; import jalview.util.MessageManager; import java.awt.BorderLayout; import java.awt.CardLayout; import java.awt.Dimension; import java.awt.FlowLayout; +import java.awt.GridLayout; import java.awt.event.ActionEvent; import java.awt.event.ItemEvent; import java.awt.event.ItemListener; +import java.awt.event.KeyAdapter; +import java.awt.event.KeyEvent; +import java.awt.event.MouseAdapter; +import java.awt.event.MouseEvent; +import java.util.Arrays; +import java.util.HashMap; +import java.util.Map; import javax.swing.ImageIcon; import javax.swing.JButton; @@ -51,6 +63,8 @@ import javax.swing.event.ChangeEvent; import javax.swing.event.ChangeListener; import javax.swing.event.DocumentEvent; import javax.swing.event.DocumentListener; +import javax.swing.event.InternalFrameEvent; +import javax.swing.table.TableColumn; @SuppressWarnings("serial") /** @@ -61,6 +75,12 @@ import javax.swing.event.DocumentListener; public abstract class GStructureChooser extends JPanel implements ItemListener { + protected JPanel statusPanel = new JPanel(); + + public JLabel statusBar = new JLabel(); + + private JPanel pnl_actionsAndStatus = new JPanel(new BorderLayout()); + protected String frameTitle = MessageManager .getString("label.structure_chooser"); @@ -70,6 +90,8 @@ public abstract class GStructureChooser extends JPanel implements protected AlignmentPanel ap; + protected StringBuilder errorWarning = new StringBuilder(); + protected JLabel lbl_result = new JLabel( MessageManager.getString("label.select")); @@ -83,7 +105,7 @@ public abstract class GStructureChooser extends JPanel implements private JPanel pnl_actions = new JPanel(); - private JPanel pnl_filter = new JPanel(); + private JPanel pnl_main = new JPanel(); private JPanel pnl_idInput = new JPanel(new FlowLayout()); @@ -93,6 +115,8 @@ public abstract class GStructureChooser extends JPanel implements private JPanel pnl_fileChooserBL = new JPanel(new BorderLayout()); + private JPanel pnl_locPDB = new JPanel(new BorderLayout()); + protected JPanel pnl_switchableViews = new JPanel(new CardLayout()); protected CardLayout layout_switchableViews = (CardLayout) (pnl_switchableViews @@ -115,13 +139,17 @@ public abstract class GStructureChooser extends JPanel implements protected ImageIcon errorImage = new ImageIcon(getClass().getResource( "/images/error.png")); + protected ImageIcon warningImage = new ImageIcon(getClass().getResource( + "/images/warning.gif")); + + protected JLabel lbl_warning = new JLabel(warningImage); + protected JLabel lbl_loading = new JLabel(loadingImage); protected JLabel lbl_pdbManualFetchStatus = new JLabel(errorImage); protected JLabel lbl_fromFileStatus = new JLabel(errorImage); - protected AssciateSeqPanel idInputAssSeqPanel = new AssciateSeqPanel(); protected AssciateSeqPanel fileChooserAssSeqPanel = new AssciateSeqPanel(); @@ -132,15 +160,100 @@ public abstract class GStructureChooser extends JPanel implements protected static final String VIEWS_ENTER_ID = "VIEWS_ENTER_ID"; - protected JTable tbl_summary = new JTable(); + protected static final String VIEWS_LOCAL_PDB = "VIEWS_LOCAL_PDB"; + + protected JTable tbl_local_pdb = new JTable(); + + protected JScrollPane scrl_localPDB = new JScrollPane(tbl_local_pdb); + + private JTabbedPane pnl_filter = new JTabbedPane(); + + protected FTSDataColumnPreferences pdbDocFieldPrefs = new FTSDataColumnPreferences( + PreferenceSource.STRUCTURE_CHOOSER, + PDBFTSRestClient.getInstance()); + + protected FTSDataColumnI[] previousWantedFields; + + protected static Map tempUserPrefs = new HashMap(); + + private JTable tbl_summary = new JTable() + { + private boolean inLayout; + + @Override + public boolean getScrollableTracksViewportWidth() + { + return hasExcessWidth(); + + } + + @Override + public void doLayout() + { + if (hasExcessWidth()) + { + autoResizeMode = AUTO_RESIZE_SUBSEQUENT_COLUMNS; + } + inLayout = true; + super.doLayout(); + inLayout = false; + autoResizeMode = AUTO_RESIZE_OFF; + } + + protected boolean hasExcessWidth() + { + return getPreferredSize().width < getParent().getWidth(); + } + + @Override + public void columnMarginChanged(ChangeEvent e) + { + if (isEditing()) + { + removeEditor(); + } + TableColumn resizingColumn = getTableHeader().getResizingColumn(); + // Need to do this here, before the parent's + // layout manager calls getPreferredSize(). + if (resizingColumn != null && autoResizeMode == AUTO_RESIZE_OFF + && !inLayout) + { + resizingColumn.setPreferredWidth(resizingColumn.getWidth()); + String colHeader = resizingColumn.getHeaderValue().toString(); + tempUserPrefs.put(colHeader, resizingColumn.getWidth()); + } + resizeAndRepaint(); + } - protected JScrollPane scrl_foundStructures = new JScrollPane( - tbl_summary); + @Override + public String getToolTipText(MouseEvent evt) + { + String toolTipText = null; + java.awt.Point pnt = evt.getPoint(); + int rowIndex = rowAtPoint(pnt); + int colIndex = columnAtPoint(pnt); - private JTabbedPane tabbedPane = new JTabbedPane(); + try + { + if (getValueAt(rowIndex, colIndex) == null) + { + return null; + } + toolTipText = getValueAt(rowIndex, colIndex).toString(); + } catch (Exception e) + { + // e.printStackTrace(); + } + toolTipText = (toolTipText == null ? null + : (toolTipText.length() > 500 ? JvSwingUtils.wrapTooltip( + true, "\"" + toolTipText.subSequence(0, 500) + + "...\"") : JvSwingUtils.wrapTooltip(true, + toolTipText))); + return toolTipText; + } + }; - private PDBDocFieldPreferences pdbDocFieldPrefs = new PDBDocFieldPreferences( - PreferenceSource.STRUCTURE_CHOOSER); + protected JScrollPane scrl_foundStructures = new JScrollPane(tbl_summary); public GStructureChooser() { @@ -163,23 +276,155 @@ public abstract class GStructureChooser extends JPanel implements */ private void jbInit() throws Exception { + Integer width = tempUserPrefs.get("structureChooser.width") == null ? 800 + : tempUserPrefs.get("structureChooser.width"); + Integer height = tempUserPrefs.get("structureChooser.height") == null ? 400 + : tempUserPrefs.get("structureChooser.height"); tbl_summary.setAutoCreateRowSorter(true); + tbl_summary.getTableHeader().setReorderingAllowed(false); + tbl_summary.addMouseListener(new MouseAdapter() + { + @Override + public void mouseClicked(MouseEvent e) + { + validateSelections(); + } + + @Override + public void mouseReleased(MouseEvent e) + { + validateSelections(); + } + }); + tbl_summary.addKeyListener(new KeyAdapter() + { + @Override + public void keyPressed(KeyEvent evt) + { + validateSelections(); + switch (evt.getKeyCode()) + { + case KeyEvent.VK_ESCAPE: // escape key + mainFrame.dispose(); + break; + case KeyEvent.VK_ENTER: // enter key + if (btn_view.isEnabled()) + { + ok_ActionPerformed(); + } + break; + case KeyEvent.VK_TAB: // tab key + if (evt.isShiftDown()) + { + pnl_filter.requestFocus(); + } + else + { + btn_view.requestFocus(); + } + evt.consume(); + break; + default: + return; + } + } + }); + tbl_local_pdb.setAutoCreateRowSorter(true); + tbl_local_pdb.getTableHeader().setReorderingAllowed(false); + tbl_local_pdb.addMouseListener(new MouseAdapter() + { + @Override + public void mouseClicked(MouseEvent e) + { + validateSelections(); + } + + @Override + public void mouseReleased(MouseEvent e) + { + validateSelections(); + } + }); + tbl_local_pdb.addKeyListener(new KeyAdapter() + { + @Override + public void keyPressed(KeyEvent evt) + { + validateSelections(); + switch (evt.getKeyCode()) + { + case KeyEvent.VK_ESCAPE: // escape key + mainFrame.dispose(); + break; + case KeyEvent.VK_ENTER: // enter key + if (btn_view.isEnabled()) + { + ok_ActionPerformed(); + } + break; + case KeyEvent.VK_TAB: // tab key + if (evt.isShiftDown()) + { + cmb_filterOption.requestFocus(); + } + else + { + if (btn_view.isEnabled()) + { + btn_view.requestFocus(); + } + else + { + btn_cancel.requestFocus(); + } + } + evt.consume(); + default: + return; + } + } + }); btn_view.setFont(new java.awt.Font("Verdana", 0, 12)); btn_view.setText(MessageManager.getString("action.view")); btn_view.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { ok_ActionPerformed(); } }); + btn_view.addKeyListener(new KeyAdapter() + { + @Override + public void keyPressed(KeyEvent evt) + { + if (evt.getKeyCode() == KeyEvent.VK_ENTER) + { + ok_ActionPerformed(); + } + } + }); + btn_cancel.setFont(new java.awt.Font("Verdana", 0, 12)); btn_cancel.setText(MessageManager.getString("action.cancel")); btn_cancel.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { - mainFrame.dispose(); + closeAction(); + } + }); + btn_cancel.addKeyListener(new KeyAdapter() + { + @Override + public void keyPressed(KeyEvent evt) + { + if (evt.getKeyCode() == KeyEvent.VK_ENTER) + { + closeAction(); + } } }); @@ -188,23 +433,36 @@ public abstract class GStructureChooser extends JPanel implements btn_pdbFromFile.setText(btn_title + " "); btn_pdbFromFile.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { pdbFromFile_actionPerformed(); } }); + btn_pdbFromFile.addKeyListener(new KeyAdapter() + { + @Override + public void keyPressed(KeyEvent evt) + { + if (evt.getKeyCode() == KeyEvent.VK_ENTER) + { + pdbFromFile_actionPerformed(); + } + } + }); - scrl_foundStructures.setPreferredSize(new Dimension(500, 300)); - scrl_foundStructures + scrl_foundStructures.setPreferredSize(new Dimension(width, height)); + + scrl_localPDB.setPreferredSize(new Dimension(width, height)); + scrl_localPDB .setHorizontalScrollBarPolicy(JScrollPane.HORIZONTAL_SCROLLBAR_NEVER); cmb_filterOption.setFont(new java.awt.Font("Verdana", 0, 12)); chk_invertFilter.setFont(new java.awt.Font("Verdana", 0, 12)); chk_rememberSettings.setFont(new java.awt.Font("Verdana", 0, 12)); - - - txt_search.setToolTipText(MessageManager - .getString("label.enter_pdb_id")); + chk_rememberSettings.setVisible(false); + txt_search.setToolTipText(JvSwingUtils.wrapTooltip(true, + MessageManager.getString("label.enter_pdb_id"))); cmb_filterOption.setToolTipText(MessageManager .getString("info.select_filter_option")); txt_search.getDocument().addDocumentListener(new DocumentListener() @@ -236,64 +494,131 @@ public abstract class GStructureChooser extends JPanel implements pnl_actions.add(btn_cancel); // pnl_filter.add(lbl_result); - pnl_filter.add(cmb_filterOption); - pnl_filter.add(lbl_loading); - pnl_filter.add(chk_invertFilter); + pnl_main.add(cmb_filterOption); + pnl_main.add(lbl_loading); + pnl_main.add(chk_invertFilter); lbl_loading.setVisible(false); - pnl_idInput.add(txt_search); - pnl_idInput.add(lbl_pdbManualFetchStatus); - pnl_fileChooser.add(btn_pdbFromFile); pnl_fileChooser.add(lbl_fromFileStatus); - pnl_fileChooserBL.add(fileChooserAssSeqPanel, BorderLayout.NORTH); pnl_fileChooserBL.add(pnl_fileChooser, BorderLayout.CENTER); + pnl_idInput.add(txt_search); + pnl_idInput.add(lbl_pdbManualFetchStatus); pnl_idInputBL.add(idInputAssSeqPanel, BorderLayout.NORTH); pnl_idInputBL.add(pnl_idInput, BorderLayout.CENTER); - + final String foundStructureSummary = MessageManager .getString("label.found_structures_summary"); - + final String configureCols = MessageManager + .getString("label.configure_displayed_columns"); ChangeListener changeListener = new ChangeListener() { + @Override public void stateChanged(ChangeEvent changeEvent) { JTabbedPane sourceTabbedPane = (JTabbedPane) changeEvent .getSource(); int index = sourceTabbedPane.getSelectedIndex(); + btn_view.setVisible(true); + btn_cancel.setVisible(true); + if (sourceTabbedPane.getTitleAt(index).equals(configureCols)) + { + btn_view.setEnabled(false); + btn_cancel.setEnabled(false); + btn_view.setVisible(false); + btn_cancel.setVisible(false); + previousWantedFields = pdbDocFieldPrefs + .getStructureSummaryFields().toArray( + new FTSDataColumnI[0]); + } if (sourceTabbedPane.getTitleAt(index) .equals(foundStructureSummary)) { - tabRefresh(); + btn_cancel.setEnabled(true); + if (wantedFieldsUpdated()) + { + tabRefresh(); + } + else + { + validateSelections(); + } } } }; - tabbedPane.addChangeListener(changeListener); - tabbedPane.setPreferredSize(new Dimension(500, 300)); - tabbedPane.add(foundStructureSummary, scrl_foundStructures); - tabbedPane.add( - MessageManager.getString("label.configure_displayed_columns"), - pdbDocFieldPrefs); - + pnl_filter.addChangeListener(changeListener); + pnl_filter.setPreferredSize(new Dimension(width, height)); + pnl_filter.add(foundStructureSummary, scrl_foundStructures); + pnl_filter.add(configureCols, pdbDocFieldPrefs); + + pnl_locPDB.add(scrl_localPDB); pnl_switchableViews.add(pnl_fileChooserBL, VIEWS_FROM_FILE); pnl_switchableViews.add(pnl_idInputBL, VIEWS_ENTER_ID); - pnl_switchableViews.add(tabbedPane, VIEWS_FILTER); - + pnl_switchableViews.add(pnl_filter, VIEWS_FILTER); + pnl_switchableViews.add(pnl_locPDB, VIEWS_LOCAL_PDB); + this.setLayout(mainLayout); - this.add(pnl_filter, java.awt.BorderLayout.NORTH); + this.add(pnl_main, java.awt.BorderLayout.NORTH); this.add(pnl_switchableViews, java.awt.BorderLayout.CENTER); - this.add(pnl_actions, java.awt.BorderLayout.SOUTH); - + // this.add(pnl_actions, java.awt.BorderLayout.SOUTH); + statusPanel.setLayout(new GridLayout()); + pnl_actionsAndStatus.add(pnl_actions, BorderLayout.CENTER); + pnl_actionsAndStatus.add(statusPanel, BorderLayout.SOUTH); + statusPanel.add(statusBar, null); + this.add(pnl_actionsAndStatus, java.awt.BorderLayout.SOUTH); + + mainFrame + .addInternalFrameListener(new javax.swing.event.InternalFrameAdapter() + { + @Override + public void internalFrameClosing(InternalFrameEvent e) + { + closeAction(); + } + }); mainFrame.setVisible(true); mainFrame.setContentPane(this); mainFrame.setDefaultCloseOperation(JFrame.DISPOSE_ON_CLOSE); - Desktop.addInternalFrame(mainFrame, frameTitle, 800, 400); + Integer x = tempUserPrefs.get("structureChooser.x"); + Integer y = tempUserPrefs.get("structureChooser.y"); + if (x != null && y != null) + { + mainFrame.setLocation(x, y); + } + Desktop.addInternalFrame(mainFrame, frameTitle, width, height); + } + + protected void closeAction() + { + // System.out.println(">>>>>>>>>> closing internal frame!!!"); + // System.out.println("width : " + mainFrame.getWidth()); + // System.out.println("heigh : " + mainFrame.getHeight()); + // System.out.println("x : " + mainFrame.getX()); + // System.out.println("y : " + mainFrame.getY()); + tempUserPrefs.put("structureChooser.width", pnl_filter.getWidth()); + tempUserPrefs.put("structureChooser.height", pnl_filter.getHeight()); + tempUserPrefs.put("structureChooser.x", mainFrame.getX()); + tempUserPrefs.put("structureChooser.y", mainFrame.getY()); + mainFrame.dispose(); + } + public boolean wantedFieldsUpdated() + { + if (previousWantedFields == null) + { + return true; + } + + FTSDataColumnI[] currentWantedFields = pdbDocFieldPrefs + .getStructureSummaryFields() + .toArray(new FTSDataColumnI[0]); + return Arrays.equals(currentWantedFields, previousWantedFields) ? false + : true; + } - @Override /** * Event listener for the 'filter' combo-box and 'invert' check-box @@ -354,6 +679,7 @@ public abstract class GStructureChooser extends JPanel implements this.view = view; } + @Override public String toString() { return this.name; @@ -370,6 +696,7 @@ public abstract class GStructureChooser extends JPanel implements public class AssociateSeqOptions { private SequenceI sequence; + private String name; public AssociateSeqOptions(SequenceI seq) @@ -385,6 +712,7 @@ public abstract class GStructureChooser extends JPanel implements this.sequence = seq; } + @Override public String toString() { return name; @@ -461,6 +789,10 @@ public abstract class GStructureChooser extends JPanel implements } } + public JTable getResultTable() + { + return tbl_summary; + } public JComboBox getCmbFilterOption() { return cmb_filterOption; @@ -484,4 +816,6 @@ public abstract class GStructureChooser extends JPanel implements public abstract void cmbAssSeqStateChanged(); public abstract void tabRefresh(); + + public abstract void validateSelections(); }