X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGTreePanel.java;h=2a1b11f6e2b8504eae2cfc92669c2d4446340312;hb=refs%2Fheads%2Fspike%2FJAL-4047%2FJAL-4048_columns_in_sequenceID;hp=2b2794670b6e663b19061fe8dc1c807c7a94e04f;hpb=4cea7a0328724b90a6a7c16ae8c926e0cc12cedd;p=jalview.git diff --git a/src/jalview/jbgui/GTreePanel.java b/src/jalview/jbgui/GTreePanel.java index 2b27946..2a1b11f 100755 --- a/src/jalview/jbgui/GTreePanel.java +++ b/src/jalview/jbgui/GTreePanel.java @@ -1,29 +1,43 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8) - * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.jbgui; +import java.awt.BorderLayout; +import java.awt.Color; +import java.awt.event.ActionEvent; +import java.awt.event.ActionListener; + +import javax.swing.JCheckBoxMenuItem; +import javax.swing.JInternalFrame; +import javax.swing.JMenu; +import javax.swing.JMenuBar; +import javax.swing.JMenuItem; +import javax.swing.JScrollPane; +import javax.swing.event.MenuEvent; +import javax.swing.event.MenuListener; + +import jalview.util.ImageMaker.TYPE; import jalview.util.MessageManager; -import java.awt.*; -import java.awt.event.*; -import javax.swing.*; -import javax.swing.event.*; - +@SuppressWarnings("serial") public class GTreePanel extends JInternalFrame { BorderLayout borderLayout1 = new BorderLayout(); @@ -78,6 +92,8 @@ public class GTreePanel extends JInternalFrame private void jbInit() throws Exception { + setFrameIcon(null); + setName("jalview-tree"); this.getContentPane().setLayout(borderLayout1); this.setBackground(Color.white); this.setFont(new java.awt.Font("Verdana", 0, 12)); @@ -86,6 +102,7 @@ public class GTreePanel extends JInternalFrame saveAsNewick.setText(MessageManager.getString("label.newick_format")); saveAsNewick.addActionListener(new ActionListener() { + @Override public void actionPerformed(ActionEvent e) { saveAsNewick_actionPerformed(e); @@ -94,6 +111,7 @@ public class GTreePanel extends JInternalFrame printMenu.setText(MessageManager.getString("action.print")); printMenu.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { printMenu_actionPerformed(e); @@ -102,38 +120,46 @@ public class GTreePanel extends JInternalFrame viewMenu.setText(MessageManager.getString("action.view")); viewMenu.addMenuListener(new MenuListener() { + @Override public void menuSelected(MenuEvent e) { viewMenu_menuSelected(); } + @Override public void menuDeselected(MenuEvent e) { } + @Override public void menuCanceled(MenuEvent e) { } }); - sortAssocViews.setText(MessageManager.getString("label.sort_alignment_by_tree")); + sortAssocViews.setText( + MessageManager.getString("label.sort_alignment_by_tree")); sortAssocViews.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { - sortByTree_actionPerformed(e); + sortByTree_actionPerformed(); } }); font.setText(MessageManager.getString("action.font")); font.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { font_actionPerformed(e); } }); - bootstrapMenu.setText(MessageManager.getString("label.show_bootstrap_values")); + bootstrapMenu.setText( + MessageManager.getString("label.show_bootstrap_values")); bootstrapMenu.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { bootstrapMenu_actionPerformed(e); @@ -142,6 +168,7 @@ public class GTreePanel extends JInternalFrame distanceMenu.setText(MessageManager.getString("label.show_distances")); distanceMenu.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { distanceMenu_actionPerformed(e); @@ -151,6 +178,7 @@ public class GTreePanel extends JInternalFrame fitToWindow.setText(MessageManager.getString("label.fit_to_window")); fitToWindow.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { fitToWindow_actionPerformed(e); @@ -159,33 +187,38 @@ public class GTreePanel extends JInternalFrame epsTree.setText("EPS"); epsTree.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { - epsTree_actionPerformed(e); + writeTreeImage(TYPE.EPS); } }); pngTree.setText("PNG"); pngTree.addActionListener(new java.awt.event.ActionListener() { + @Override public void actionPerformed(ActionEvent e) { - pngTree_actionPerformed(e); + writeTreeImage(TYPE.PNG); } }); saveAsMenu.setText(MessageManager.getString("action.save_as")); - placeholdersMenu - .setToolTipText(MessageManager.getString("label.marks_leaves_tree_not_associated_with_sequence")); - placeholdersMenu.setText(MessageManager.getString("label.mark_unlinked_leaves")); + placeholdersMenu.setToolTipText(MessageManager.getString( + "label.marks_leaves_tree_not_associated_with_sequence")); + placeholdersMenu.setText( + MessageManager.getString("label.mark_unlinked_leaves")); placeholdersMenu.addActionListener(new ActionListener() { + @Override public void actionPerformed(ActionEvent e) { placeholdersMenu_actionPerformed(e); } }); - textbox.setText(MessageManager.getString("label.out_to_textbox") + "..."); + textbox.setText(MessageManager.getString("label.out_to_textbox")); textbox.addActionListener(new ActionListener() { + @Override public void actionPerformed(ActionEvent e) { textbox_actionPerformed(e); @@ -194,12 +227,14 @@ public class GTreePanel extends JInternalFrame originalSeqData.setText(MessageManager.getString("label.input_data")); originalSeqData.addActionListener(new ActionListener() { + @Override public void actionPerformed(ActionEvent e) { originalSeqData_actionPerformed(e); } }); - associateLeavesMenu.setText(MessageManager.getString("label.associate_leaves_with")); + associateLeavesMenu.setText( + MessageManager.getString("label.associate_leaves_with")); this.getContentPane().add(scrollPane, BorderLayout.CENTER); jMenuBar1.add(fileMenu); jMenuBar1.add(viewMenu); @@ -239,11 +274,7 @@ public class GTreePanel extends JInternalFrame { } - public void pngTree_actionPerformed(ActionEvent e) - { - } - - public void epsTree_actionPerformed(ActionEvent e) + public void writeTreeImage(TYPE imageType) { } @@ -273,7 +304,7 @@ public class GTreePanel extends JInternalFrame { } - public void sortByTree_actionPerformed(ActionEvent e) + public void sortByTree_actionPerformed() { }