X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGTreePanel.java;h=a892993c2c88d4cf7213594745085c67b5cceb10;hb=4eefb40838faa0a3c03be3480ff74ba2ac67a5c1;hp=e67518b54d46756ac3a28d84d1c892c3ab1ce317;hpb=764f4139569c1135e41348b24943c3e6d22f74ef;p=jalview.git

diff --git a/src/jalview/jbgui/GTreePanel.java b/src/jalview/jbgui/GTreePanel.java
index e67518b..a892993 100755
--- a/src/jalview/jbgui/GTreePanel.java
+++ b/src/jalview/jbgui/GTreePanel.java
@@ -1,138 +1,225 @@
-package jalview.jbgui;
-
-import java.awt.*;
-import javax.swing.*;
-import java.awt.event.*;
-
-public class GTreePanel extends JInternalFrame
-{
-  BorderLayout borderLayout1 = new BorderLayout();
-  protected JScrollPane scrollPane = new JScrollPane();
-  JMenuBar jMenuBar1 = new JMenuBar();
-  JMenu jMenu1 = new JMenu();
-  JMenuItem saveMenu = new JMenuItem();
-  JMenuItem printMenu = new JMenuItem();
-  JMenu jMenu2 = new JMenu();
-  protected JMenuItem fontSize = new JMenuItem();
-  protected JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();
-  protected JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();
-  protected JCheckBoxMenuItem fitToWindow = new JCheckBoxMenuItem();
-
-  public GTreePanel()
-  {
-    try
-    {
-      jbInit();
-      this.setJMenuBar(jMenuBar1);
-    }
-    catch(Exception e)
-    {
-      e.printStackTrace();
-    }
-
-  }
-  private void jbInit() throws Exception
-  {
-    this.getContentPane().setLayout(borderLayout1);
-    this.setBackground(Color.white);
-    this.setFont(new java.awt.Font("Verdana", 0, 12));
-    scrollPane.setOpaque(false);
-    jMenu1.setText("File");
-    saveMenu.setEnabled(false);
-    saveMenu.setText("Save");
-    saveMenu.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        saveMenu_actionPerformed(e);
-      }
-    });
-    printMenu.setText("Print");
-    printMenu.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        printMenu_actionPerformed(e);
-      }
-    });
-    jMenu2.setText("View");
-    fontSize.setText("Font Size - 12");
-    fontSize.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        fontSize_actionPerformed(e);
-      }
-    });
-    bootstrapMenu.setText("Show Bootstrap values");
-    bootstrapMenu.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        bootstrapMenu_actionPerformed(e);
-      }
-    });
-    distanceMenu.setText("Show Distances");
-    distanceMenu.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        distanceMenu_actionPerformed(e);
-      }
-    });
-    fitToWindow.setSelected(true);
-    fitToWindow.setText("Fit to window");
-    fitToWindow.addActionListener(new java.awt.event.ActionListener()
-    {
-      public void actionPerformed(ActionEvent e)
-      {
-        fitToWindow_actionPerformed(e);
-      }
-    });
-    this.getContentPane().add(scrollPane, BorderLayout.CENTER);
-    jMenuBar1.add(jMenu1);
-    jMenuBar1.add(jMenu2);
-    jMenu1.add(saveMenu);
-    jMenu1.add(printMenu);
-    jMenu2.add(fitToWindow);
-    jMenu2.add(fontSize);
-    jMenu2.add(distanceMenu);
-    jMenu2.add(bootstrapMenu);
-  }
-
-  protected void saveMenu_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void printMenu_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void fontSize_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void distanceMenu_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void bootstrapMenu_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-  protected void fitToWindow_actionPerformed(ActionEvent e)
-  {
-
-  }
-
-
-
-
-
-
-}
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer
+ * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 2
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+ */
+package jalview.jbgui;
+
+import java.awt.*;
+import java.awt.event.*;
+import javax.swing.*;
+
+public class GTreePanel
+    extends JInternalFrame
+{
+  BorderLayout borderLayout1 = new BorderLayout();
+  public JScrollPane scrollPane = new JScrollPane();
+  JMenuBar jMenuBar1 = new JMenuBar();
+  JMenu jMenu1 = new JMenu();
+  JMenuItem saveAsNewick = new JMenuItem();
+  JMenuItem printMenu = new JMenuItem();
+  JMenu jMenu2 = new JMenu();
+  public JMenuItem font = new JMenuItem();
+  public JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();
+  public JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();
+  public JCheckBoxMenuItem fitToWindow = new JCheckBoxMenuItem();
+  public JCheckBoxMenuItem placeholdersMenu = new JCheckBoxMenuItem();
+  JMenuItem pngTree = new JMenuItem();
+  JMenuItem epsTree = new JMenuItem();
+  JMenu saveAsMenu = new JMenu();
+  JMenuItem textbox = new JMenuItem();
+  public JMenuItem originalSeqData = new JMenuItem();
+  public GTreePanel()
+  {
+    try
+    {
+      jbInit();
+      this.setJMenuBar(jMenuBar1);
+    }
+    catch (Exception e)
+    {
+      e.printStackTrace();
+    }
+  }
+
+  private void jbInit()
+      throws Exception
+  {
+    this.getContentPane().setLayout(borderLayout1);
+    this.setBackground(Color.white);
+    this.setFont(new java.awt.Font("Verdana", 0, 12));
+    scrollPane.setOpaque(false);
+    jMenu1.setText("File");
+    saveAsNewick.setText("Newick Format");
+    saveAsNewick.addActionListener(new ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        saveAsNewick_actionPerformed(e);
+      }
+    });
+    printMenu.setText("Print");
+    printMenu.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        printMenu_actionPerformed(e);
+      }
+    });
+    jMenu2.setText("View");
+    font.setText("Font...");
+    font.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        font_actionPerformed(e);
+      }
+    });
+    bootstrapMenu.setText("Show Bootstrap Values");
+    bootstrapMenu.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        bootstrapMenu_actionPerformed(e);
+      }
+    });
+    distanceMenu.setText("Show Distances");
+    distanceMenu.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        distanceMenu_actionPerformed(e);
+      }
+    });
+    fitToWindow.setSelected(true);
+    fitToWindow.setText("Fit To Window");
+    fitToWindow.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        fitToWindow_actionPerformed(e);
+      }
+    });
+    epsTree.setText("EPS");
+    epsTree.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        epsTree_actionPerformed(e);
+      }
+    });
+    pngTree.setText("PNG");
+    pngTree.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        pngTree_actionPerformed(e);
+      }
+    });
+    saveAsMenu.setText("Save as");
+    placeholdersMenu.setToolTipText(
+        "Marks leaves of tree not associated with a sequence");
+    placeholdersMenu.setText("Mark Unlinked Leaves");
+    placeholdersMenu.addActionListener(new ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        placeholdersMenu_actionPerformed(e);
+      }
+    });
+    textbox.setText("Output to Textbox...");
+    textbox.addActionListener(new ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        textbox_actionPerformed(e);
+      }
+    });
+    originalSeqData.setText("Input Data...");
+    originalSeqData.addActionListener(new ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        originalSeqData_actionPerformed(e);
+      }
+    });
+    this.getContentPane().add(scrollPane, BorderLayout.CENTER);
+    jMenuBar1.add(jMenu1);
+    jMenuBar1.add(jMenu2);
+    jMenu1.add(saveAsMenu);
+    jMenu1.add(textbox);
+    jMenu1.add(printMenu);
+    jMenu1.add(originalSeqData);
+    jMenu2.add(fitToWindow);
+    jMenu2.add(font);
+    jMenu2.add(distanceMenu);
+    jMenu2.add(bootstrapMenu);
+    jMenu2.add(placeholdersMenu);
+    saveAsMenu.add(saveAsNewick);
+    saveAsMenu.add(epsTree);
+    saveAsMenu.add(pngTree);
+  }
+
+  public void printMenu_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void font_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void distanceMenu_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void bootstrapMenu_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void fitToWindow_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void pngTree_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void epsTree_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void saveAsNewick_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void placeholdersMenu_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void textbox_actionPerformed(ActionEvent e)
+  {
+  }
+
+  public void fullid_actionPerformed(ActionEvent e)
+  {
+
+  }
+
+  public void originalSeqData_actionPerformed(ActionEvent e)
+  {
+
+  }
+}