X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGTreePanel.java;h=f8a72035c411bbce8f62f118b48d2de5d3b52298;hb=6403068c0c328cfb63af451f7fa1bd568fa0fdd3;hp=d6677f441ff2a5bd22b5a996187b7d5eb4b5ee22;hpb=506d60f0e188723ddc91c26824b41ac7034df3fe;p=jalview.git

diff --git a/src/jalview/jbgui/GTreePanel.java b/src/jalview/jbgui/GTreePanel.java
index d6677f4..f8a7203 100755
--- a/src/jalview/jbgui/GTreePanel.java
+++ b/src/jalview/jbgui/GTreePanel.java
@@ -1,20 +1,19 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
+ * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
  * 
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
+ * This file is part of Jalview.
  * 
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- * GNU General Public License for more details.
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
  * 
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  */
 package jalview.jbgui;
 
@@ -41,6 +40,8 @@ public class GTreePanel extends JInternalFrame
 
   public JMenuItem font = new JMenuItem();
 
+  public JMenuItem sortAssocViews = new JMenuItem();
+
   public JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();
 
   public JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();
@@ -112,6 +113,14 @@ public class GTreePanel extends JInternalFrame
       {
       }
     });
+    sortAssocViews.setText("Sort Alignment By Tree");
+    sortAssocViews.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        sortByTree_actionPerformed(e);
+      }
+    });
     font.setText("Font...");
     font.addActionListener(new java.awt.event.ActionListener()
     {
@@ -201,6 +210,7 @@ public class GTreePanel extends JInternalFrame
     viewMenu.add(distanceMenu);
     viewMenu.add(bootstrapMenu);
     viewMenu.add(placeholdersMenu);
+    viewMenu.add(sortAssocViews);
     viewMenu.add(associateLeavesMenu);
     saveAsMenu.add(saveAsNewick);
     saveAsMenu.add(epsTree);
@@ -260,4 +270,9 @@ public class GTreePanel extends JInternalFrame
   public void viewMenu_menuSelected()
   {
   }
+  public void sortByTree_actionPerformed(ActionEvent e)
+  {
+
+  }
+
 }