X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fmath%2FMatrix.java;h=b6e77ed159212198d55e70751df1554f32208fb1;hb=797df64fa2a0a30773d0f48f5494d4155e5a8be3;hp=b7f8705f2630c413e2f9940d22e070ad47d8e847;hpb=2de8acfae59aced665e4c37ad0f7dcc2ed68818e;p=jalview.git

diff --git a/src/jalview/math/Matrix.java b/src/jalview/math/Matrix.java
index b7f8705..b6e77ed 100755
--- a/src/jalview/math/Matrix.java
+++ b/src/jalview/math/Matrix.java
@@ -1,20 +1,19 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
- * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
  * 
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
+ * This file is part of Jalview.
  * 
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- * GNU General Public License for more details.
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
  * 
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  */
 package jalview.math;
 
@@ -51,11 +50,11 @@ public class Matrix
    * Creates a new Matrix object.
    * 
    * @param value
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    * @param rows
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    * @param cols
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    */
   public Matrix(double[][] value, int rows, int cols)
   {
@@ -88,7 +87,7 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param ps
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    */
   public void print(PrintStream ps)
   {
@@ -107,7 +106,7 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param in
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    * 
    * @return DOCUMENT ME!
    */
@@ -135,7 +134,7 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param in
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    * 
    * @return DOCUMENT ME!
    */
@@ -160,7 +159,7 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param in
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    * 
    * @return DOCUMENT ME!
    */
@@ -708,9 +707,9 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param a
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    * @param b
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    * 
    * @return DOCUMENT ME!
    */
@@ -730,7 +729,7 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param n
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    * 
    * @return DOCUMENT ME!
    */
@@ -750,7 +749,7 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param ps
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    */
   public void printD(PrintStream ps)
   {
@@ -764,7 +763,7 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param ps
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    */
   public void printE(PrintStream ps)
   {
@@ -778,7 +777,7 @@ public class Matrix
    * DOCUMENT ME!
    * 
    * @param args
-   *                DOCUMENT ME!
+   *          DOCUMENT ME!
    */
   public static void main(String[] args)
   {